Gene
RNA
| Item | Value |
|---|---|
| gene id | G1921545 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 29180311 ~ 29180710 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2197396 | True | 400 | lncRNA | 0.55 | 1 | 29180311 | 29180710 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504129 | LOC106613156 | coding | upstream | 140703 | 29026037 ~ 29039608 (+) |
| LOC110503390 | efhd1 | coding | upstream | 236871 | 28927758 ~ 28943440 (+) |
| trnag-ucc-230 | NA | coding | upstream | 252686 | 28927554 ~ 28927625 (+) |
| trnap-agg-155 | NA | coding | upstream | 258996 | 28921244 ~ 28921315 (+) |
| trnai-aau-84 | NA | coding | upstream | 264003 | 28916235 ~ 28916308 (+) |
| LOC110503387 | fat3 | coding | downstream | 131275 | 29311985 ~ 29659405 (+) |
| LOC118944007 | NA | coding | downstream | 483467 | 29664177 ~ 29751463 (+) |
| LOC110504126 | LOC106613152 | coding | downstream | 603708 | 29784418 ~ 29786182 (+) |
| LOC110503157 | LOC106592784 | coding | downstream | 1244325 | 30425035 ~ 30429010 (+) |
| LOC110503160 | ilk | coding | downstream | 1295282 | 30475992 ~ 30497130 (+) |
| G1921544 | NA | non-coding | upstream | 3573 | 29176511 ~ 29176738 (+) |
| G1921543 | NA | non-coding | upstream | 3909 | 29176202 ~ 29176402 (+) |
| G1921538 | NA | non-coding | upstream | 7186 | 29172911 ~ 29173125 (+) |
| G1921495 | LOC100380853 | non-coding | upstream | 56351 | 29123628 ~ 29123960 (+) |
| G1921484 | NA | non-coding | upstream | 68186 | 29111840 ~ 29112125 (+) |
| G1921593 | NA | non-coding | downstream | 53543 | 29234253 ~ 29235161 (+) |
| G1921599 | NA | non-coding | downstream | 56501 | 29237211 ~ 29237761 (+) |
| G1921602 | NA | non-coding | downstream | 60466 | 29241176 ~ 29241402 (+) |
| G1921612 | NA | non-coding | downstream | 66713 | 29247423 ~ 29247629 (+) |
| G1921663 | NA | non-coding | downstream | 145741 | 29326451 ~ 29330876 (+) |
| G1920101 | LOC106613131 | other | upstream | 1357561 | 27820794 ~ 27822750 (+) |
| G1919949 | NA | other | upstream | 1561848 | 27617023 ~ 27618463 (+) |
| G1919459 | NA | other | upstream | 2125096 | 27054908 ~ 27055215 (+) |
| G1919064 | LOC106613117 | other | upstream | 2137037 | 27036345 ~ 27043274 (+) |
| G1922041 | LOC106613152 | other | downstream | 529170 | 29709880 ~ 29785287 (+) |
| G1922637 | NA | other | downstream | 1106849 | 30287559 ~ 30289340 (+) |
| G1923728 | NA | other | downstream | 2101233 | 31281943 ~ 31282157 (+) |
| G1923824 | NA | other | downstream | 2273620 | 31454330 ~ 31455689 (+) |
| G1924021 | NA | other | downstream | 2722817 | 31903527 ~ 31908662 (+) |
