Gene
RNA
| Item | Value |
|---|---|
| gene id | G1921602 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 29241176 ~ 29241402 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2197461 | True | 227 | lncRNA | 0.45 | 1 | 29241176 | 29241402 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504129 | LOC106613156 | coding | upstream | 201568 | 29026037 ~ 29039608 (+) |
| LOC110503390 | efhd1 | coding | upstream | 297736 | 28927758 ~ 28943440 (+) |
| trnag-ucc-230 | NA | coding | upstream | 313551 | 28927554 ~ 28927625 (+) |
| trnap-agg-155 | NA | coding | upstream | 319861 | 28921244 ~ 28921315 (+) |
| trnai-aau-84 | NA | coding | upstream | 324868 | 28916235 ~ 28916308 (+) |
| LOC110503387 | fat3 | coding | downstream | 70583 | 29311985 ~ 29659405 (+) |
| LOC118944007 | NA | coding | downstream | 422775 | 29664177 ~ 29751463 (+) |
| LOC110504126 | LOC106613152 | coding | downstream | 543016 | 29784418 ~ 29786182 (+) |
| LOC110503157 | LOC106592784 | coding | downstream | 1183633 | 30425035 ~ 30429010 (+) |
| LOC110503160 | ilk | coding | downstream | 1234590 | 30475992 ~ 30497130 (+) |
| G1921599 | NA | non-coding | upstream | 3415 | 29237211 ~ 29237761 (+) |
| G1921593 | NA | non-coding | upstream | 6015 | 29234253 ~ 29235161 (+) |
| G1921545 | NA | non-coding | upstream | 60466 | 29180311 ~ 29180710 (+) |
| G1921544 | NA | non-coding | upstream | 64438 | 29176511 ~ 29176738 (+) |
| G1921543 | NA | non-coding | upstream | 64774 | 29176202 ~ 29176402 (+) |
| G1921612 | NA | non-coding | downstream | 6021 | 29247423 ~ 29247629 (+) |
| G1921663 | NA | non-coding | downstream | 85049 | 29326451 ~ 29330876 (+) |
| G1921703 | NA | non-coding | downstream | 159323 | 29400725 ~ 29401153 (+) |
| G1921704 | NA | non-coding | downstream | 162547 | 29403949 ~ 29404296 (+) |
| G1921765 | NA | non-coding | downstream | 271044 | 29512446 ~ 29512684 (+) |
| G1920101 | LOC106613131 | other | upstream | 1418426 | 27820794 ~ 27822750 (+) |
| G1919949 | NA | other | upstream | 1622713 | 27617023 ~ 27618463 (+) |
| G1919459 | NA | other | upstream | 2185961 | 27054908 ~ 27055215 (+) |
| G1919064 | LOC106613117 | other | upstream | 2197902 | 27036345 ~ 27043274 (+) |
| G1922041 | LOC106613152 | other | downstream | 468478 | 29709880 ~ 29785287 (+) |
| G1922637 | NA | other | downstream | 1046157 | 30287559 ~ 30289340 (+) |
| G1923728 | NA | other | downstream | 2040541 | 31281943 ~ 31282157 (+) |
| G1923824 | NA | other | downstream | 2212928 | 31454330 ~ 31455689 (+) |
| G1924021 | NA | other | downstream | 2662125 | 31903527 ~ 31908662 (+) |
