G1925870


Basic Information

Item Value
gene id G1925870
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 33742659 ~ 33748253 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2202189
gataaggcgttgttagggatggtcccgttgggggataaggcgttgttagggatggtcccgttggggaataaggtgttgttagggatggtcccgttgggggataaggtgttgttagggatggtcccgttggggaataaggtgttgttagggatggtcccgttgggggataaggtgttgttagggatggtcccgttgtggaataaggtgttgttagggatGTTCCCGTTGTGGAataaggtgttgttagggatggtcccg
>TU2202186
gataaggtggCGGTAGGGATGttcccgttgggggataaggtggcggtagggatggtcccgttgggggataaggtggCGGTAGGGATGTTCCCGTTGGGGAataaggtgttgttagggatggtcccgttgggggataaggtgttgttagggatGTTCCCGTTGGGGAataaggtgttgttagggatGGTCCCTTTGGGGAATAAGGAGTTGTTAGGGATGGTCCCGTTGTGGAataaggtgttgttagggatggtcccgttggggaataaggtgttgttagggatggtcccgttggggaataaggtgttgttagggatGGTCCCTTTGGGGAataaggtgttgttagggatGGTCCCTTTGGGGAATAAGGAGTTGTtagggatggtcccgttggggAATAAGGAGTTGTtagggatggtcccgttggggaataaggtgttgttagggatgttcccgttgggggataaggaGTTGTTA
>TU2202187
gataaggtggCGGTAGGGATGttcccgttgggggataaggtggcggtagggatggtcccgttgggggataaggtggCGGTAGGGATGTTCCCGTTGGGGAataaggtgttgttagggatggtcccgttgggggataaggtgttgttagggatGTTCCCGTTGGGGAataaggtgttgttagggatGGTCCCTTTGGGGAATAAGGAGTTGTTAGGGATGGTCCCGTTGTGGAataaggtgttgttagggatggtcccgttggggaataaggtgttgttagggatggtcccgttggggaataaggtgttgttagggatGGTCCCTTTGGGGAataaggtgttgttagggatGGTCCCTTTGGGGAataaggtgttgttagggatggtcccgttggggAATAAGGCGTTGTTAGGGCtggtcccgttgggggataaggtgttgttagggatggtcccgttggggAATAAGGCGTTGTTAGGGATGGTCCCGTTGTGGAataaggtgttgttagggatgttcccgttgggggataaggtgttgttagggatggtcccg
>TU2202188
gataaggtggCGGTAGGGATGttcccgttgggggataaggtggcggtagggatggtcccgttgggggataaggtggCGGTAGGGATGTTCCCGTTGGGGAataaggtgttgttagggatggtcccgttgggggataaggtgttgttagggatGTTCCCGTTGGGGAataaggtgttgttagggatGGTCCCTTTGGGGAATAAGGAGTTGTTAGGGATGGTCCCGTTGTGGAataaggtgttgttagggatggtcccgttggggaataaggtgttgttagggatggtcccgttggggaataaggtgttgttagggatGGTCCCTTTGGGGAataaggtgttgttagggatGGTCCCTTTGGGGAATAAGGAGTTGTtagggatggtcccgttggggAATAAGGTGTTGTTAG

Function

NR:

description
PREDICTED: apolipoprotein A-IV-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2202189 False 258 lncRNA 0.52 2 33742659 33746746
TU2202186 False 477 TUCP 0.52 3 33745928 33748253
TU2202187 False 555 TUCP 0.53 3 33745928 33746746
TU2202188 True 412 TUCP 0.52 2 33745928 33746504

Neighbor

gene id symbol gene type direction distance location
folr folr1 coding upstream 43426 33694095 ~ 33699233 (+)
tomt LOC106613223 coding upstream 53590 33680812 ~ 33689069 (+)
sfrp2l LOC106613226 coding upstream 61976 33678566 ~ 33680683 (+)
lrrc51 LOC106613228 coding upstream 74031 33666316 ~ 33668628 (+)
LOC110503180 LOC100136230 coding upstream 115769 33621269 ~ 33626890 (+)
LOC110503215 ssr3 coding downstream 416962 34163708 ~ 34171184 (+)
LOC110503415 LOC106581457 coding downstream 718534 34465280 ~ 34479078 (+)
c18h3orf33 cssa09h3orf33 coding downstream 732554 34479300 ~ 34490990 (+)
LOC110503217 LOC106613270 coding downstream 754928 34501674 ~ 34638201 (+)
LOC110503419 LOC106581479 coding downstream 893639 34640176 ~ 34648173 (+)
G1925865 NA non-coding upstream 9401 33732417 ~ 33733258 (+)
G1925837 NA non-coding upstream 52579 33689082 ~ 33690080 (+)
G1925829 numa1 non-coding upstream 86575 33650868 ~ 33656084 (+)
G1925826 numa1 non-coding upstream 93432 33648095 ~ 33649227 (+)
G1925806 NA non-coding upstream 155962 33586470 ~ 33586697 (+)
G1925873 NA non-coding downstream 16440 33763186 ~ 33764035 (+)
G1925874 NA non-coding downstream 17539 33764285 ~ 33764889 (+)
inppl1a inppl1 non-coding downstream 30326 33700330 ~ 33778761 (+)
G1925882 NA non-coding downstream 35304 33782050 ~ 33782756 (+)
G1925884 NA non-coding downstream 37045 33783791 ~ 33784282 (+)
G1925778 NA other upstream 200727 33541189 ~ 33541932 (+)
G1925777 NA other upstream 202178 33539938 ~ 33540481 (+)
G1925688 NA other upstream 421003 33321188 ~ 33321656 (+)
LOC110503398 LOC106591258 other upstream 1317830 32366174 ~ 32425791 (+)
G1924661 NA other upstream 1519653 32222691 ~ 32223006 (+)
G1926351 NA other downstream 333759 34079223 ~ 34082461 (+)
G1927540 NA other downstream 1633156 35379902 ~ 35381869 (+)
G1928169 NA other downstream 2394483 36141229 ~ 36170471 (+)
G1928170 NA other downstream 2419880 36166626 ~ 36169329 (+)

Expression

G1925870 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 50.
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G1925870 Expression in each Bioproject

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G1925870 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
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Co-expression Network