G1928169


Basic Information

Item Value
gene id G1928169
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 36141229 ~ 36170471 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2204948
aaaaaaaaaaaaaaaaaaaaaaaaacattcctatTTGGCTAACAGTGATTCAGATTCATGGTCAACTTCCCCCTCAAAAAAAAAGGTGTTGGAACTACAGAATGCACTGGACCACAATACAAACTGATGGAACATTCAGCTAACCCATTCCAAAAAGGTGTTGGAACTACAGAATGCACTGGACCACAATACAAACTGATGGAACATTCAGCTAACCCATTCCAAAAAGGAACCAACATCTGATTTTGGAAAACAAACTGCCGGAATCTAAATGGAGAAATCCGATAGGTCGTCTGAGGTGGGTTCAGTGCAATATCTCATCACATTCACAGGATATCATGATTGATGGATTATTCAAAATGCTGAGGAGggggaaaataaaacaaatagtAGAAATTGATGTTGACATTGTTAAAAAGCAGTGGGTGAGACTATCCCCTATGAAAAGGACGGGTCGTTTCCTAGACACAGAGTAACACCTGCTAGAGACGAGCAAAgcaacacattttttgttgttgttgaaatgatcAGAATTAGCATTCACTACCATCAAGTACCACTGCTGACCTTGTGATGTCAACACAACTCACTTCCATAGTGCAGTTGTGTCGAGTCTAGAGTTCTGAGGACCGACGAAGATACCTGATATGCTGAGAGACCTTAGACTAATTCCCCATAATGCACCCCACTCAAGAGCTCTTGGCCAAAGTAGTGACCTACATGGTCAATAATGAGCCCCAGTCATCTCACAGCAGGGCCAGGCTCTTCTCGAGGCTGGCGATGTCCGCCTCCCCGTCCTCCCCCTTGCTGCCTCGGGCGCTGCACTCCAGGAACTCCACCTTCATGGGCAGCTGGCTGAACTCAAAGTCCTTGCCTTTCTTTCCCAGGTGCACGCTGGCCCCCGCTGACCCGTCCTGGGCGCTCAGAGCCGCAGACCGAGTCACTCTCAG
>TU2204947
ACAAAAACAGATTTTATTTACAAGCTGAAtaagacacaaaaaaaaaaacattcctatTTGGCTAACAGTGATTCAGATTCATGGTCAACTTCCCCCTCAAAAAAAAAGGTGTTGGAACTACAGAATGCACTGGACCACAATACAAACTGATGGAACATTCAGCTAACCCATTCCAAAAAGGAACCAACATCTGATTTTGGAAAACAAACTGCCGGAATCTAAATGGAGAAATCCGATAGGTCGTCTGAGGTGGGTTCAGTGCAATATCTCATCACATTCACAGGATATCATGATTGATGGATTATTCAAAATGCTGAGGAGggggaaaataaaacaaatagtAGAAATTGATGTTGACATTGTTAAAAAGCAGTGGGTGAGACTATCCCCTATGAAAAGGACGGGTCGTTTCCTAGACACAGAGTAACACCTGCTAGAGACGAGCAAAgcaacacattttttgttgttgttgaaatgatcAGAATTAGCATTCACTACCATCAAGTACCACTGCTGACCTTGTGATGTCAACACAACTCACTTCCATAGTGCAGTTGTGTCGAGTCTAGAGTTCTGAGGACCGACGAAGATACCTGATATGCTGAGAGACCTTAGACTAATTCCCCATAATGCACCCCACTCAAGAGCTCTTGGCCAAAGTAGTGACCTATGGGAACTAAATGGCTCTTGGCCAAAGTAGTGACCTATGGGAACTAAATGGCTCTTGGCCAAAGTAGTGACCTATGGGAACTACATGGTCAATAATGAGCCCCAGTCATCTCACAGCAGGGCCAGGCTCTTCTCGAGGCTGGCGATGTCCGCCTCCCCGTCCTCCCCCTTGCTGCCTCGGGCGCTGCACTCCAGGAACTCCACCTTCATGGGCAGCTGGCTGAACTCAAAGTCCTTGCCTTTCTTTCCCAGGTGCACGCTGGCCCCCGCTGACCCGTCCTGGGCGCTCAGAGCCGCAGACCGAGTCACTCTCAG

Function

NR:

description
signal recognition particle receptor subunit beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2204948 False 950 TUCP 0.46 3 36141229 36170471
TU2204947 True 984 TUCP 0.46 2 36169416 36170471

Neighbor

gene id symbol gene type direction distance location
LOC110503428 LOC106581496 coding upstream 15009 36124822 ~ 36126220 (+)
LOC110503248 LOC106613310 coding upstream 20865 36114887 ~ 36120364 (+)
LOC110503247 LOC106613308 coding upstream 75575 36041556 ~ 36065654 (+)
LOC110503239 LOC106613303 coding upstream 809546 35309975 ~ 35331683 (+)
LOC110503233 LOC106581478 coding upstream 1141729 34990271 ~ 34999500 (+)
LOC110503252 LOC106581503 coding downstream 10088 36180559 ~ 36218330 (+)
LOC110503435 LOC106581515 coding downstream 85421 36255892 ~ 36413741 (+)
LOC110517470 sh2b2 coding downstream 264487 36434958 ~ 36498284 (+)
bud23 wbscr22 coding downstream 335417 36505888 ~ 36512484 (+)
LOC110503243 LOC106613311 coding downstream 370992 36541463 ~ 36560736 (+)
G1928142 NA non-coding upstream 38543 36102483 ~ 36102686 (+)
G1928133 NA non-coding upstream 42937 36097482 ~ 36098292 (+)
G1928124 NA non-coding upstream 50880 36090044 ~ 36090349 (+)
G1928114 NA non-coding upstream 61114 36079890 ~ 36080115 (+)
G1928196 NA non-coding downstream 39507 36209978 ~ 36211963 (+)
G1928239 NA non-coding downstream 51717 36222188 ~ 36222543 (+)
G1928258 NA non-coding downstream 71433 36241904 ~ 36242233 (+)
G1928263 NA non-coding downstream 78516 36248987 ~ 36252176 (+)
G1928308 NA non-coding downstream 152601 36323072 ~ 36323454 (+)
G1927540 NA other upstream 759360 35379902 ~ 35381869 (+)
LOC110503217 LOC106613270 other upstream 1504106 34501674 ~ 34638201 (+)
G1926351 NA other upstream 2059494 34079223 ~ 34082461 (+)
G1925870 NA other upstream 2392976 33742659 ~ 33748253 (+)
G1925778 NA other upstream 2599297 33541189 ~ 33541932 (+)
G1928430 NA other downstream 491403 36661874 ~ 36662497 (+)
LOC110503264 LOC106581527 other downstream 887535 36985873 ~ 37079320 (+)
urb1 urb1 other downstream 1003135 37125695 ~ 37191160 (+)
LOC110503265 scaf4 other downstream 1031388 37193636 ~ 37239498 (+)
LOC110503436 tiam1 other downstream 1121191 37291589 ~ 37375534 (+)

Expression


Co-expression Network