Gene
RNA
| Item | Value |
|---|---|
| gene id | G1928458 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 36741820 ~ 36742384 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2205366 | True | 510 | lncRNA | 0.54 | 2 | 36741820 | 36742384 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503243 | LOC106613311 | coding | upstream | 181084 | 36541463 ~ 36560736 (+) |
| bud23 | wbscr22 | coding | upstream | 229336 | 36505888 ~ 36512484 (+) |
| LOC110517470 | sh2b2 | coding | upstream | 243536 | 36434958 ~ 36498284 (+) |
| LOC110503435 | LOC106581515 | coding | upstream | 328079 | 36255892 ~ 36413741 (+) |
| LOC110503252 | LOC106581503 | coding | upstream | 523490 | 36180559 ~ 36218330 (+) |
| LOC110503269 | LOC106613363 | coding | downstream | 185527 | 36927911 ~ 36933490 (+) |
| LOC110503268 | LOC106613360 | coding | downstream | 200511 | 36942895 ~ 36960462 (+) |
| LOC110503264 | LOC106581527 | coding | downstream | 243489 | 36985873 ~ 37079320 (+) |
| urb1 | urb1 | coding | downstream | 383311 | 37125695 ~ 37191160 (+) |
| LOC118944028 | NA | coding | downstream | 396254 | 37138638 ~ 37139270 (+) |
| G1928456 | NA | non-coding | upstream | 14677 | 36726314 ~ 36727143 (+) |
| G1928446 | NA | non-coding | upstream | 46933 | 36694628 ~ 36694887 (+) |
| G1928434 | NA | non-coding | upstream | 68922 | 36672668 ~ 36672898 (+) |
| G1928432 | NA | non-coding | upstream | 73438 | 36668045 ~ 36668382 (+) |
| G1928408 | NA | non-coding | upstream | 141235 | 36599239 ~ 36600585 (+) |
| G1928436 | NA | non-coding | downstream | 9673 | 36752057 ~ 36752666 (+) |
| G1928461 | NA | non-coding | downstream | 14873 | 36757257 ~ 37151803 (+) |
| G1928498 | NA | non-coding | downstream | 97375 | 36839759 ~ 36857237 (+) |
| G1928545 | NA | non-coding | downstream | 180999 | 36923383 ~ 36924775 (+) |
| G1928579 | NA | non-coding | downstream | 264662 | 37007046 ~ 37007707 (+) |
| G1928430 | NA | other | upstream | 79323 | 36661874 ~ 36662497 (+) |
| G1928169 | NA | other | upstream | 571349 | 36141229 ~ 36170471 (+) |
| G1928170 | NA | other | upstream | 572491 | 36166626 ~ 36169329 (+) |
| G1927540 | NA | other | upstream | 1359951 | 35379902 ~ 35381869 (+) |
| LOC110503217 | LOC106613270 | other | upstream | 2104697 | 34501674 ~ 34638201 (+) |
| LOC110503265 | scaf4 | other | downstream | 459475 | 37193636 ~ 37239498 (+) |
| LOC110503436 | tiam1 | other | downstream | 549278 | 37291589 ~ 37375534 (+) |
| G1928752 | NA | other | downstream | 692519 | 37434903 ~ 37435441 (+) |
