G1928545


Basic Information

Item Value
gene id G1928545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 36923383 ~ 36924775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2205471
TGGGAAGGTCTAATGGCTTGGGAGCCAGTAGTGATGGCCTGGGTTTGGAGGCATAGCCGGTGCAGGGGGAGCTGGCAGCTGTCCCCGGACATGTCCCTCTGAAGGTAGATGACCACCCTGCAGACGGAGGTCTTGATGTCCCCCGCCGTGGTGACAGCTACTGGGGGGGCCGCCACAGCCTCTCACTGGCCCTGCAGATCATACCCCACGCCGTCTTTCTCTTAGGGTAATTATTTTCGCTGAATAGTTCAGTACATTATAAGCTATGTAATGTAGCTACGCCAACTACAATTGTAAATATTCACAAGGCAACGACGTTAAATAACTATCCCCAACTACAGAAAAGTTGACTACTACAAATAATGATTCTTCTTCGATAaagcggttggcatccaataaatgttgcattaccgccacctactagactggagtacaactccTTTATAATTAGCttgaaaaaataaa

Function

NR:

description
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2205471 True 465 lncRNA 0.48 2 36923383 36924775

Neighbor

gene id symbol gene type direction distance location
LOC110503266 LOC106613355 coding upstream 173754 36673822 ~ 36749629 (+)
LOC110503243 LOC106613311 coding upstream 362647 36541463 ~ 36560736 (+)
bud23 wbscr22 coding upstream 410899 36505888 ~ 36512484 (+)
LOC110517470 sh2b2 coding upstream 425099 36434958 ~ 36498284 (+)
LOC110503435 LOC106581515 coding upstream 509642 36255892 ~ 36413741 (+)
LOC110503269 LOC106613363 coding downstream 3136 36927911 ~ 36933490 (+)
LOC110503268 LOC106613360 coding downstream 18120 36942895 ~ 36960462 (+)
LOC110503264 LOC106581527 coding downstream 61098 36985873 ~ 37079320 (+)
urb1 urb1 coding downstream 200920 37125695 ~ 37191160 (+)
LOC118944028 NA coding downstream 213863 37138638 ~ 37139270 (+)
G1928498 NA non-coding upstream 66146 36839759 ~ 36857237 (+)
G1928436 NA non-coding upstream 170717 36752057 ~ 36752666 (+)
G1928458 NA non-coding upstream 180999 36741820 ~ 36742384 (+)
G1928456 NA non-coding upstream 196240 36726314 ~ 36727143 (+)
G1928446 NA non-coding upstream 228496 36694628 ~ 36694887 (+)
G1928579 NA non-coding downstream 82271 37007046 ~ 37007707 (+)
G1928584 NA non-coding downstream 91899 37016674 ~ 37020415 (+)
G1928586 NA non-coding downstream 111793 37036568 ~ 37038709 (+)
G1928618 NA non-coding downstream 199209 37123984 ~ 37124641 (+)
G1928623 NA non-coding downstream 204900 37129675 ~ 37132501 (+)
G1928430 NA other upstream 260886 36661874 ~ 36662497 (+)
G1928169 NA other upstream 752912 36141229 ~ 36170471 (+)
G1928170 NA other upstream 754054 36166626 ~ 36169329 (+)
G1927540 NA other upstream 1541514 35379902 ~ 35381869 (+)
LOC110503217 LOC106613270 other upstream 2286260 34501674 ~ 34638201 (+)
LOC110503265 scaf4 other downstream 277084 37193636 ~ 37239498 (+)
LOC110503436 tiam1 other downstream 366887 37291589 ~ 37375534 (+)
G1928752 NA other downstream 510128 37434903 ~ 37435441 (+)

Expression


Co-expression Network