Gene
RNA
| Item | Value |
|---|---|
| gene id | G1928584 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 37016674 ~ 37020415 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: circumsporozoite protein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2205517 | True | 429 | lncRNA | 0.56 | 2 | 37016674 | 37020415 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503268 | LOC106613360 | coding | upstream | 56212 | 36942895 ~ 36960462 (+) |
| LOC110503269 | LOC106613363 | coding | upstream | 83184 | 36927911 ~ 36933490 (+) |
| LOC110503266 | LOC106613355 | coding | upstream | 267045 | 36673822 ~ 36749629 (+) |
| LOC110503243 | LOC106613311 | coding | upstream | 455938 | 36541463 ~ 36560736 (+) |
| bud23 | wbscr22 | coding | upstream | 504190 | 36505888 ~ 36512484 (+) |
| urb1 | urb1 | coding | downstream | 105280 | 37125695 ~ 37191160 (+) |
| LOC118944028 | NA | coding | downstream | 118223 | 37138638 ~ 37139270 (+) |
| LOC110503265 | scaf4 | coding | downstream | 173221 | 37193636 ~ 37239498 (+) |
| LOC118944105 | NA | coding | downstream | 224062 | 37244477 ~ 37291414 (+) |
| LOC110503436 | tiam1 | coding | downstream | 271174 | 37291589 ~ 37375534 (+) |
| G1928579 | NA | non-coding | upstream | 8967 | 37007046 ~ 37007707 (+) |
| G1928545 | NA | non-coding | upstream | 91899 | 36923383 ~ 36924775 (+) |
| G1928498 | NA | non-coding | upstream | 159437 | 36839759 ~ 36857237 (+) |
| G1928436 | NA | non-coding | upstream | 264008 | 36752057 ~ 36752666 (+) |
| G1928458 | NA | non-coding | upstream | 274290 | 36741820 ~ 36742384 (+) |
| G1928586 | NA | non-coding | downstream | 16153 | 37036568 ~ 37038709 (+) |
| G1928618 | NA | non-coding | downstream | 103569 | 37123984 ~ 37124641 (+) |
| G1928623 | NA | non-coding | downstream | 109260 | 37129675 ~ 37132501 (+) |
| G1928624 | NA | non-coding | downstream | 109782 | 37130197 ~ 37131172 (+) |
| G1928633 | NA | non-coding | downstream | 132545 | 37152960 ~ 37153239 (+) |
| G1928430 | NA | other | upstream | 354177 | 36661874 ~ 36662497 (+) |
| G1928169 | NA | other | upstream | 846203 | 36141229 ~ 36170471 (+) |
| G1928170 | NA | other | upstream | 847345 | 36166626 ~ 36169329 (+) |
| G1927540 | NA | other | upstream | 1634805 | 35379902 ~ 35381869 (+) |
| LOC110503217 | LOC106613270 | other | upstream | 2379551 | 34501674 ~ 34638201 (+) |
| LOC110503264 | LOC106581527 | other | downstream | 37591 | 36985873 ~ 37079320 (+) |
| G1928752 | NA | other | downstream | 414488 | 37434903 ~ 37435441 (+) |
