G1928586


Basic Information

Item Value
gene id G1928586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 37036568 ~ 37038709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2205520
cacactatggacccacaacacgaccacccctcacactatgaacccacaacacgaccacccctcacactatggaccacaacacaaccacccctcacatatggacccacaacacgaccacccctcacactatgaacccacaacacgaccacccctcacactatggaccacaacacaaccacccctcacactatggaccacaacacaaccacccctcacactatggaccacaacacgaccaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2205520 True 241 lncRNA 0.55 2 37036568 37038709

Neighbor

gene id symbol gene type direction distance location
LOC110503268 LOC106613360 coding upstream 76106 36942895 ~ 36960462 (+)
LOC110503269 LOC106613363 coding upstream 103078 36927911 ~ 36933490 (+)
LOC110503266 LOC106613355 coding upstream 286939 36673822 ~ 36749629 (+)
LOC110503243 LOC106613311 coding upstream 475832 36541463 ~ 36560736 (+)
bud23 wbscr22 coding upstream 524084 36505888 ~ 36512484 (+)
urb1 urb1 coding downstream 86986 37125695 ~ 37191160 (+)
LOC118944028 NA coding downstream 99929 37138638 ~ 37139270 (+)
LOC110503265 scaf4 coding downstream 154927 37193636 ~ 37239498 (+)
LOC118944105 NA coding downstream 205768 37244477 ~ 37291414 (+)
LOC110503436 tiam1 coding downstream 252880 37291589 ~ 37375534 (+)
G1928584 NA non-coding upstream 16153 37016674 ~ 37020415 (+)
G1928579 NA non-coding upstream 28861 37007046 ~ 37007707 (+)
G1928545 NA non-coding upstream 111793 36923383 ~ 36924775 (+)
G1928498 NA non-coding upstream 179331 36839759 ~ 36857237 (+)
G1928436 NA non-coding upstream 283902 36752057 ~ 36752666 (+)
G1928618 NA non-coding downstream 85275 37123984 ~ 37124641 (+)
G1928623 NA non-coding downstream 90966 37129675 ~ 37132501 (+)
G1928624 NA non-coding downstream 91488 37130197 ~ 37131172 (+)
G1928633 NA non-coding downstream 114251 37152960 ~ 37153239 (+)
G1928637 NA non-coding downstream 135946 37174655 ~ 37175182 (+)
G1928430 NA other upstream 374071 36661874 ~ 36662497 (+)
G1928169 NA other upstream 866097 36141229 ~ 36170471 (+)
G1928170 NA other upstream 867239 36166626 ~ 36169329 (+)
G1927540 NA other upstream 1654699 35379902 ~ 35381869 (+)
LOC110503217 LOC106613270 other upstream 2399445 34501674 ~ 34638201 (+)
LOC110503264 LOC106581527 other downstream 19297 36985873 ~ 37079320 (+)
G1928752 NA other downstream 396194 37434903 ~ 37435441 (+)

Expression


Co-expression Network