G1928623


Basic Information

Item Value
gene id G1928623
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 37129675 ~ 37132501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2205560
gaaggtaatcaggcaggaagaaccaaagggagtgacatatatagggaaggtaatcagacaggaagaaccaGAGGGAagtgacagatttagggaaggtaatcagacaggaagaaccaaagggagtgacagatttagggaaggtaatcaggcaggaagaaccaaagggagagtgacagatttagggaaggtaatcaggcaggaagaaccaaagggaTTGacagatttagggaaggtaatcaggcaggaagaaccaaagggagtgacagatttagggaaggtaatcagacaggaagaaccaaagggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2205560 True 305 lncRNA 0.46 2 37129675 37132501

Neighbor

gene id symbol gene type direction distance location
LOC110503264 LOC106581527 coding upstream 50355 36985873 ~ 37079320 (+)
LOC110503268 LOC106613360 coding upstream 169213 36942895 ~ 36960462 (+)
LOC110503269 LOC106613363 coding upstream 196185 36927911 ~ 36933490 (+)
LOC110503266 LOC106613355 coding upstream 380046 36673822 ~ 36749629 (+)
LOC110503243 LOC106613311 coding upstream 568939 36541463 ~ 36560736 (+)
LOC118944028 NA coding downstream 6137 37138638 ~ 37139270 (+)
LOC110503265 scaf4 coding downstream 61135 37193636 ~ 37239498 (+)
LOC118944105 NA coding downstream 111976 37244477 ~ 37291414 (+)
LOC110503436 tiam1 coding downstream 159088 37291589 ~ 37375534 (+)
LOC118944100 NA coding downstream 243090 37375591 ~ 37377209 (+)
G1928618 NA non-coding upstream 5034 37123984 ~ 37124641 (+)
G1928586 NA non-coding upstream 90966 37036568 ~ 37038709 (+)
G1928584 NA non-coding upstream 109260 37016674 ~ 37020415 (+)
G1928579 NA non-coding upstream 121968 37007046 ~ 37007707 (+)
G1928545 NA non-coding upstream 204900 36923383 ~ 36924775 (+)
G1928633 NA non-coding downstream 20459 37152960 ~ 37153239 (+)
G1928637 NA non-coding downstream 42154 37174655 ~ 37175182 (+)
G1928644 NA non-coding downstream 54314 37186815 ~ 37187027 (+)
G1928645 NA non-coding downstream 56050 37188551 ~ 37189282 (+)
G1928430 NA other upstream 467178 36661874 ~ 36662497 (+)
G1928169 NA other upstream 959204 36141229 ~ 36170471 (+)
G1928170 NA other upstream 960346 36166626 ~ 36169329 (+)
G1927540 NA other upstream 1747806 35379902 ~ 35381869 (+)
urb1 urb1 other downstream 41105 37125695 ~ 37191160 (+)
G1928752 NA other downstream 302402 37434903 ~ 37435441 (+)
G1928756 NA other downstream 313366 37445561 ~ 37464638 (+)

Expression


Co-expression Network