G1928645


Basic Information

Item Value
gene id G1928645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 37188551 ~ 37189282 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2205583
cccccaagacatgctaacctctcaccattacaataacaggggaggttagcatttaatatcatatccccaagacatgctaacctctcaccattacaataacaggagaggttagcatttaatatcatacccccaagacatgctaacctctcaccattacaataacaggggaggttagcatttaatatcatatccccaagacatgctaacctctcaccattacaataacag
>TU2205585
cattttatatcatacccccaagacatgctaacctctcatcattacaataacaggggaggttagcatttaatatcatacccccaagacatgctaacctctcaccattacaataacaggggaggttagcattttatatcatacccccaagacatgctaacctctcatcattacaataacaggggaggttagcattttatatcatacccccaagacatgctaacctctcaccattacaataacaggggaggttagcattttatatcatacccccaagacatgctaacctctcatcattacaataacagggg
>TU2205584
acaataacaggggaggttagcatttaatatcatatccccaagacatgctaacctctcaccattacaataacaggagaggttagcatttaatatcatacccccaagacatgctaacctctcaccattacaataacaggggaggttagcattttatatcatacccccaagacatgctaacctctcatcattacaataacaggggaggttagcattttatatcatacccccaagacatgctaacctctcaccattacaataacaggggaggttagcatttaatatcatacccccaagacatgctaacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106565965 isoform X11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2205583 False 228 lncRNA 0.41 3 37188551 37189282
TU2205585 False 308 lncRNA 0.40 2 37188600 37189033
TU2205584 True 305 lncRNA 0.40 2 37188706 37189073

Neighbor

gene id symbol gene type direction distance location
LOC118944028 NA coding upstream 49281 37138638 ~ 37139270 (+)
LOC110503264 LOC106581527 coding upstream 109231 36985873 ~ 37079320 (+)
LOC110503268 LOC106613360 coding upstream 228089 36942895 ~ 36960462 (+)
LOC110503269 LOC106613363 coding upstream 255061 36927911 ~ 36933490 (+)
LOC110503266 LOC106613355 coding upstream 438922 36673822 ~ 36749629 (+)
LOC110503265 scaf4 coding downstream 4354 37193636 ~ 37239498 (+)
LOC118944105 NA coding downstream 55195 37244477 ~ 37291414 (+)
LOC110503436 tiam1 coding downstream 102307 37291589 ~ 37375534 (+)
LOC118944100 NA coding downstream 186309 37375591 ~ 37377209 (+)
LOC118944094 NA coding downstream 188455 37377737 ~ 37380221 (+)
G1928644 NA non-coding upstream 1524 37186815 ~ 37187027 (+)
G1928637 NA non-coding upstream 13369 37174655 ~ 37175182 (+)
G1928633 NA non-coding upstream 35312 37152960 ~ 37153239 (+)
G1928623 NA non-coding upstream 56050 37129675 ~ 37132501 (+)
G1928624 NA non-coding upstream 57379 37130197 ~ 37131172 (+)
G1928700 NA non-coding downstream 121671 37310953 ~ 37312672 (+)
G1928704 NA non-coding downstream 131725 37321007 ~ 37321206 (+)
G1928705 NA non-coding downstream 135606 37324888 ~ 37325183 (+)
G1928736 NA non-coding downstream 214449 37403731 ~ 37403933 (+)
urb1 urb1 other upstream 5029 37125695 ~ 37191160 (+)
G1928430 NA other upstream 526054 36661874 ~ 36662497 (+)
G1928169 NA other upstream 1018080 36141229 ~ 36170471 (+)
G1928752 NA other downstream 245621 37434903 ~ 37435441 (+)
G1928756 NA other downstream 256585 37445561 ~ 37464638 (+)
G1928851 NA other downstream 443933 37633215 ~ 37634159 (+)

Expression


Co-expression Network