G1928705


Basic Information

Item Value
gene id G1928705
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 37324888 ~ 37325183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2205656
GTACTGACATCTTCTCTATGAACCAGGGTGAGTTACAGTAGTCCTCCACACAGACATCTTCTCTGTGAACCAGGGTGAGTTACAGTAGTCCTCCACACAGACATCTTCTCTATGAACCAGGGTGAGTTACAGTAGTCCTCCACACAGACATCTTCTCTATGAACCAGGGTGAGTTACAGTAGTCCTCCACACAGACATCTTCTCTATGAACCAGGGTGAGTTACAGTAGACCTCTACACAGACATCTTCTCTATGAACCAGGGTGAGTTACAGTAGTCCTCCACACAGACATCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2205656 True 296 lncRNA 0.47 1 37324888 37325183

Neighbor

gene id symbol gene type direction distance location
LOC118944105 NA coding upstream 33474 37244477 ~ 37291414 (+)
LOC110503265 scaf4 coding upstream 85390 37193636 ~ 37239498 (+)
urb1 urb1 coding upstream 133728 37125695 ~ 37191160 (+)
LOC118944028 NA coding upstream 185618 37138638 ~ 37139270 (+)
LOC110503264 LOC106581527 coding upstream 245568 36985873 ~ 37079320 (+)
LOC118944100 NA coding downstream 50408 37375591 ~ 37377209 (+)
LOC118944094 NA coding downstream 52554 37377737 ~ 37380221 (+)
LOC110503254 LOC106613331 coding downstream 84946 37410129 ~ 37413673 (+)
LOC110503430 LOC106613330 coding downstream 105888 37431071 ~ 37432117 (+)
or112-1 LOC106613329 coding downstream 115643 37440826 ~ 37442646 (+)
G1928704 NA non-coding upstream 3682 37321007 ~ 37321206 (+)
G1928700 NA non-coding upstream 12216 37310953 ~ 37312672 (+)
LOC110503436 tiam1 non-coding upstream 31139 37291589 ~ 37375534 (+)
G1928645 NA non-coding upstream 135606 37188551 ~ 37189282 (+)
G1928644 NA non-coding upstream 137861 37186815 ~ 37187027 (+)
G1928736 NA non-coding downstream 78548 37403731 ~ 37403933 (+)
G1928743 NA non-coding downstream 97363 37422546 ~ 37422884 (+)
G1928745 NA non-coding downstream 100115 37425298 ~ 37425652 (+)
G1928746 NA non-coding downstream 100663 37425846 ~ 37426358 (+)
G1928751 NA non-coding downstream 107733 37432916 ~ 37433394 (+)
G1928430 NA other upstream 662391 36661874 ~ 36662497 (+)
G1928752 NA other downstream 109720 37434903 ~ 37435441 (+)
G1928756 NA other downstream 120684 37445561 ~ 37464638 (+)
G1928851 NA other downstream 308032 37633215 ~ 37634159 (+)
LOC110511668 LOC106591056 other downstream 747015 38039863 ~ 38121778 (+)
G1929037 NA other downstream 872715 38197898 ~ 38198524 (+)

Expression


Co-expression Network