G1928743


Basic Information

Item Value
gene id G1928743
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 37422546 ~ 37422884 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2205701
acacaagataaaataaataagtataaatatgggttgtatttacaatggtgtgtgttcttcactggttgcccttttctcgtggcaacaggtcacaaatcttgctgctgtgatggaacactgtggtatttcacccagtagatatgggagtttatcaaaattggatttgttttcgaattctttgtggatctgtgtaatctgagggaaatatgcatctctaatatggtcatacgttggacagtttttttgttaattctttccaatgtgtcaagtaattatctttttgttttctcatgaattggttgggtctaattgtgctgctgtcctggggctctgtggggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2205701 True 339 lncRNA 0.37 1 37422546 37422884

Neighbor

gene id symbol gene type direction distance location
LOC110503254 LOC106613331 coding upstream 8873 37410129 ~ 37413673 (+)
LOC118944094 NA coding upstream 42325 37377737 ~ 37380221 (+)
LOC118944100 NA coding upstream 45337 37375591 ~ 37377209 (+)
LOC110503436 tiam1 coding upstream 47012 37291589 ~ 37375534 (+)
LOC118944105 NA coding upstream 131132 37244477 ~ 37291414 (+)
LOC110503430 LOC106613330 coding downstream 8187 37431071 ~ 37432117 (+)
or112-1 LOC106613329 coding downstream 17942 37440826 ~ 37442646 (+)
LOC110511319 LOC106613336 coding downstream 523779 37946663 ~ 37973546 (+)
LOC118944107 NA coding downstream 553761 37976645 ~ 37979130 (+)
LOC110511668 LOC106591056 coding downstream 616979 38039863 ~ 38121778 (+)
G1928736 NA non-coding upstream 18613 37403731 ~ 37403933 (+)
G1928705 NA non-coding upstream 97363 37324888 ~ 37325183 (+)
G1928704 NA non-coding upstream 101340 37321007 ~ 37321206 (+)
G1928700 NA non-coding upstream 109874 37310953 ~ 37312672 (+)
G1928745 NA non-coding downstream 2414 37425298 ~ 37425652 (+)
G1928746 NA non-coding downstream 2962 37425846 ~ 37426358 (+)
G1928751 NA non-coding downstream 10032 37432916 ~ 37433394 (+)
G1928753 NA non-coding downstream 14842 37437726 ~ 37437961 (+)
G1928756 NA non-coding downstream 22677 37445561 ~ 37464638 (+)
LOC110503265 scaf4 other upstream 219360 37193636 ~ 37239498 (+)
urb1 urb1 other upstream 239024 37125695 ~ 37191160 (+)
LOC110503264 LOC106581527 other upstream 359002 36985873 ~ 37079320 (+)
G1928430 NA other upstream 760049 36661874 ~ 36662497 (+)
G1928752 NA other downstream 12019 37434903 ~ 37435441 (+)
G1928851 NA other downstream 210331 37633215 ~ 37634159 (+)
G1929037 NA other downstream 775014 38197898 ~ 38198524 (+)

Expression


Co-expression Network