G1928751


Basic Information

Item Value
gene id G1928751
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 37432916 ~ 37433394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2205710
ACACGAAGATTGTGCACGCATAATTTAAACATCTAATTACAACGTGAAACGGTTTCACATATACCTGAATGACATCTGACAACAAAATCAGAGCACATTTTTCTATTCAATCCGCCAGCTAGACTAAAGTTCctttaagaaaaaaaataaagttaGTCTTAAACTACATCAGAATAATCTTCCTTTATATGTGAAGATCTGTGGACAaagacacaggacaggacaggaagactGTGGTTTATGATCAAACTCACAGAAAAGGACAGGACAGTAAAGGCTGTTGTTGATAATCTaagacacaggacaggacaggaagactGTGGTTTATGATCAAACTCACAGAAAAGGACAGGACAGTAAAGGCTGTTGTTGAAAATCAaagacacaggacaggacaggaaggcTGTTGTTGATCATCTaagacacaggacaggacattaataattgttgataattaatggtCATAGTTAGAGAGTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2205710 True 479 lncRNA 0.37 1 37432916 37433394

Neighbor

gene id symbol gene type direction distance location
LOC110503430 LOC106613330 coding upstream 799 37431071 ~ 37432117 (+)
LOC110503254 LOC106613331 coding upstream 19243 37410129 ~ 37413673 (+)
LOC118944094 NA coding upstream 52695 37377737 ~ 37380221 (+)
LOC118944100 NA coding upstream 55707 37375591 ~ 37377209 (+)
LOC110503436 tiam1 coding upstream 57382 37291589 ~ 37375534 (+)
or112-1 LOC106613329 coding downstream 7432 37440826 ~ 37442646 (+)
LOC110511319 LOC106613336 coding downstream 513269 37946663 ~ 37973546 (+)
LOC118944107 NA coding downstream 543251 37976645 ~ 37979130 (+)
LOC110511668 LOC106591056 coding downstream 606469 38039863 ~ 38121778 (+)
rasgrp4 rasgrp4 coding downstream 1030041 38463435 ~ 38523166 (+)
G1928746 NA non-coding upstream 6558 37425846 ~ 37426358 (+)
G1928745 NA non-coding upstream 7264 37425298 ~ 37425652 (+)
G1928743 NA non-coding upstream 10032 37422546 ~ 37422884 (+)
G1928736 NA non-coding upstream 28983 37403731 ~ 37403933 (+)
G1928705 NA non-coding upstream 107733 37324888 ~ 37325183 (+)
G1928753 NA non-coding downstream 4332 37437726 ~ 37437961 (+)
G1928756 NA non-coding downstream 12167 37445561 ~ 37464638 (+)
G1928780 NA non-coding downstream 101789 37535183 ~ 37537378 (+)
G1928801 NA non-coding downstream 123409 37556803 ~ 37557291 (+)
G1928802 NA non-coding downstream 124238 37557632 ~ 37557962 (+)
LOC110503265 scaf4 other upstream 229730 37193636 ~ 37239498 (+)
urb1 urb1 other upstream 249394 37125695 ~ 37191160 (+)
LOC110503264 LOC106581527 other upstream 369372 36985873 ~ 37079320 (+)
G1928430 NA other upstream 770419 36661874 ~ 36662497 (+)
G1928752 NA other downstream 1509 37434903 ~ 37435441 (+)
G1928851 NA other downstream 199821 37633215 ~ 37634159 (+)
G1929037 NA other downstream 764504 38197898 ~ 38198524 (+)

Expression


Co-expression Network