G1928803


Basic Information

Item Value
gene id G1928803
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 37558265 ~ 37559059 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2205789
GTACATAGTCATCTAGAGACAATACATtgtccatggtaatgtagagaaGACAATATAatgtccatggtaatgtagagaaGACAATATAATGTCCACGGTAATGTAGAGAGAATaGACAATATAATGTCCACGGTAATGTAGAGAAGACAATATAatgtccatggtaatgtagagaaGACAATATAATGTCCACGGTAATGTAGAGAAGACAATATAatgtccatggtaatgtagagaaGACAATATAatgtccatggtaatgtagagagAATAGACAatgtccatggtaatgtagagagAATAGACAATATAATGTCCACGGTAATGTAGAGAGAATAGACAATATAatgtccatggtaatgtagagaaGACAATATAatgtccatggtaatgtagagagAATAGACAatgtccatggtaatgtagagaaGACAATATAatgtccatggtaatgtagagaaGACAATATAATGTCCACGGTAATGTAGAGAAGACAATATAATGTCCACGGTAATGTAGAGAATAGACAATATAatgtcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2205789 True 541 lncRNA 0.34 2 37558265 37559059

Neighbor

gene id symbol gene type direction distance location
or112-1 LOC106613329 coding upstream 115619 37440826 ~ 37442646 (+)
LOC110503430 LOC106613330 coding upstream 126148 37431071 ~ 37432117 (+)
LOC110503254 LOC106613331 coding upstream 144592 37410129 ~ 37413673 (+)
LOC118944094 NA coding upstream 178044 37377737 ~ 37380221 (+)
LOC118944100 NA coding upstream 181056 37375591 ~ 37377209 (+)
LOC110511319 LOC106613336 coding downstream 387604 37946663 ~ 37973546 (+)
LOC118944107 NA coding downstream 417586 37976645 ~ 37979130 (+)
LOC110511668 LOC106591056 coding downstream 480804 38039863 ~ 38121778 (+)
rasgrp4 rasgrp4 coding downstream 904376 38463435 ~ 38523166 (+)
LOC110503272 NA coding downstream 967825 38526884 ~ 38527767 (+)
G1928802 NA non-coding upstream 303 37557632 ~ 37557962 (+)
G1928801 NA non-coding upstream 974 37556803 ~ 37557291 (+)
G1928780 NA non-coding upstream 20887 37535183 ~ 37537378 (+)
G1928756 NA non-coding upstream 98548 37445561 ~ 37464638 (+)
G1928753 NA non-coding upstream 120304 37437726 ~ 37437961 (+)
G1928808 NA non-coding downstream 8419 37567478 ~ 37567910 (+)
G1928813 NA non-coding downstream 20966 37580025 ~ 37581372 (+)
G1928829 LOC106613339 non-coding downstream 40846 37599905 ~ 37601560 (+)
G1928836 NA non-coding downstream 54615 37613674 ~ 37614662 (+)
G1928848 NA non-coding downstream 70458 37629517 ~ 37630641 (+)
G1928752 NA other upstream 122824 37434903 ~ 37435441 (+)
LOC110503436 tiam1 other upstream 265849 37291589 ~ 37375534 (+)
LOC110503265 scaf4 other upstream 355079 37193636 ~ 37239498 (+)
urb1 urb1 other upstream 374743 37125695 ~ 37191160 (+)
G1928851 NA other downstream 74156 37633215 ~ 37634159 (+)
G1929037 NA other downstream 638839 38197898 ~ 38198524 (+)
G1929196 NA other downstream 950787 38509846 ~ 38513105 (+)
ppp1r13l ppp1r13l other downstream 1031122 38590146 ~ 38653011 (+)

Expression


Co-expression Network