Gene
RNA
| Item | Value |
|---|---|
| gene id | G1928836 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 37613674 ~ 37614662 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| mitogen-activated protein kinase-binding protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2205832 | True | 332 | lncRNA | 0.52 | 2 | 37613674 | 37614662 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| or112-1 | LOC106613329 | coding | upstream | 171028 | 37440826 ~ 37442646 (+) |
| LOC110503430 | LOC106613330 | coding | upstream | 181557 | 37431071 ~ 37432117 (+) |
| LOC110503254 | LOC106613331 | coding | upstream | 200001 | 37410129 ~ 37413673 (+) |
| LOC118944094 | NA | coding | upstream | 233453 | 37377737 ~ 37380221 (+) |
| LOC118944100 | NA | coding | upstream | 236465 | 37375591 ~ 37377209 (+) |
| LOC110511319 | LOC106613336 | coding | downstream | 332001 | 37946663 ~ 37973546 (+) |
| LOC118944107 | NA | coding | downstream | 361983 | 37976645 ~ 37979130 (+) |
| LOC110511668 | LOC106591056 | coding | downstream | 425201 | 38039863 ~ 38121778 (+) |
| rasgrp4 | rasgrp4 | coding | downstream | 848773 | 38463435 ~ 38523166 (+) |
| LOC110503272 | NA | coding | downstream | 912222 | 38526884 ~ 38527767 (+) |
| G1928829 | LOC106613339 | non-coding | upstream | 12114 | 37599905 ~ 37601560 (+) |
| G1928813 | NA | non-coding | upstream | 32302 | 37580025 ~ 37581372 (+) |
| G1928808 | NA | non-coding | upstream | 45764 | 37567478 ~ 37567910 (+) |
| G1928803 | NA | non-coding | upstream | 54615 | 37558265 ~ 37559059 (+) |
| G1928802 | NA | non-coding | upstream | 55712 | 37557632 ~ 37557962 (+) |
| G1928848 | NA | non-coding | downstream | 14855 | 37629517 ~ 37630641 (+) |
| G1928868 | NA | non-coding | downstream | 47999 | 37662661 ~ 37681467 (+) |
| G1928876 | NA | non-coding | downstream | 49871 | 37664533 ~ 37665919 (+) |
| G1928889 | NA | non-coding | downstream | 88618 | 37703280 ~ 37704064 (+) |
| G1928905 | NA | non-coding | downstream | 201878 | 37816540 ~ 37816844 (+) |
| G1928756 | NA | other | upstream | 149036 | 37445561 ~ 37464638 (+) |
| G1928752 | NA | other | upstream | 178233 | 37434903 ~ 37435441 (+) |
| LOC110503436 | tiam1 | other | upstream | 321258 | 37291589 ~ 37375534 (+) |
| LOC110503265 | scaf4 | other | upstream | 410488 | 37193636 ~ 37239498 (+) |
| urb1 | urb1 | other | upstream | 430152 | 37125695 ~ 37191160 (+) |
| G1928851 | NA | other | downstream | 18553 | 37633215 ~ 37634159 (+) |
| G1929037 | NA | other | downstream | 583236 | 38197898 ~ 38198524 (+) |
| G1929196 | NA | other | downstream | 895184 | 38509846 ~ 38513105 (+) |
| ppp1r13l | ppp1r13l | other | downstream | 975519 | 38590146 ~ 38653011 (+) |
