G1928979


Basic Information

Item Value
gene id G1928979
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 38022173 ~ 38023865 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206007
agaagtttcaaaacaataaagacattacaaatgtcatattatatatatatacagtattttaacaatgtacaaatggttaaagtacacaagataaaataaataagcataaatatgggttgtatttacaatggtgtgtgttcttcactggttgcccttttctcgtggcaacaggtcacacatcttgctgctgtgatgtcacactgtggaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206007 True 209 lncRNA 0.32 2 38022173 38023865

Neighbor

gene id symbol gene type direction distance location
LOC118944107 NA coding upstream 43043 37976645 ~ 37979130 (+)
LOC110511319 LOC106613336 coding upstream 48627 37946663 ~ 37973546 (+)
or112-1 LOC106613329 coding upstream 579527 37440826 ~ 37442646 (+)
LOC110503430 LOC106613330 coding upstream 590056 37431071 ~ 37432117 (+)
LOC110503254 LOC106613331 coding upstream 608500 37410129 ~ 37413673 (+)
LOC110511668 LOC106591056 coding downstream 15998 38039863 ~ 38121778 (+)
rasgrp4 rasgrp4 coding downstream 439570 38463435 ~ 38523166 (+)
LOC110503272 NA coding downstream 503019 38526884 ~ 38527767 (+)
ppp1r13l ppp1r13l coding downstream 566281 38590146 ~ 38653011 (+)
LOC118944104 NA coding downstream 696917 38711025 ~ 38736584 (+)
G1928962 NA non-coding upstream 40542 37981412 ~ 37981631 (+)
G1928915 NA non-coding upstream 144187 37870942 ~ 37877986 (+)
G1928914 NA non-coding upstream 176227 37845515 ~ 37845946 (+)
G1928905 NA non-coding upstream 205329 37816540 ~ 37816844 (+)
G1928994 NA non-coding downstream 40441 38064306 ~ 38064621 (+)
G1929003 NA non-coding downstream 56891 38080756 ~ 38081065 (+)
G1929005 NA non-coding downstream 66879 38090744 ~ 38091786 (+)
G1929006 NA non-coding downstream 67243 38091108 ~ 38092115 (+)
G1928989 NA non-coding downstream 77986 38101851 ~ 38184911 (+)
G1928851 NA other upstream 388014 37633215 ~ 37634159 (+)
G1928756 NA other upstream 557535 37445561 ~ 37464638 (+)
G1928752 NA other upstream 586732 37434903 ~ 37435441 (+)
LOC110503436 tiam1 other upstream 729757 37291589 ~ 37375534 (+)
LOC110503265 scaf4 other upstream 818987 37193636 ~ 37239498 (+)
G1929037 NA other downstream 174033 38197898 ~ 38198524 (+)
G1929196 NA other downstream 485981 38509846 ~ 38513105 (+)
bicra LOC106613370 other downstream 907974 38845482 ~ 38932575 (+)

Expression


Co-expression Network