Gene
RNA
| Item | Value |
|---|---|
| gene id | G1930654 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 38076584 ~ 38126994 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2208228 | True | 266 | lncRNA | 0.47 | 2 | 38076584 | 38126994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944103 | LOC106613334 | coding | downstream | 55230 | 37984081 ~ 38021354 (-) |
| tgfb1a | tgfb1b | coding | downstream | 160568 | 37873005 ~ 37916016 (-) |
| LOC110503255 | LOC106613338 | coding | downstream | 358312 | 37679493 ~ 37718272 (-) |
| LOC118944019 | NA | coding | downstream | 384354 | 37689230 ~ 37692230 (-) |
| LOC110503256 | LOC106613340 | coding | downstream | 397494 | 37664514 ~ 37679090 (-) |
| LOC110503258 | LOC105027022 | coding | upstream | 57187 | 38184181 ~ 38196994 (-) |
| ryr1b | LOC103368738 | coding | upstream | 75746 | 38202740 ~ 38436340 (-) |
| hnrnpul1 | LOC105027039 | coding | upstream | 404434 | 38531428 ~ 38570785 (-) |
| opa3 | opa3 | coding | upstream | 450931 | 38577925 ~ 38584847 (-) |
| exosc5 | exosc5 | coding | upstream | 638345 | 38765339 ~ 38770808 (-) |
| G1930615 | NA | non-coding | downstream | 3684 | 37982894 ~ 38072900 (-) |
| G1930614 | NA | non-coding | downstream | 94320 | 37981722 ~ 37982264 (-) |
| G1930610 | NA | non-coding | downstream | 105073 | 37971150 ~ 37971511 (-) |
| G1930601 | NA | non-coding | downstream | 130217 | 37946132 ~ 37946367 (-) |
| G1930717 | NA | non-coding | upstream | 118135 | 38245129 ~ 38246172 (-) |
| G1930748 | NA | non-coding | upstream | 208653 | 38335647 ~ 38402368 (-) |
| G1930789 | NA | non-coding | upstream | 330597 | 38457591 ~ 38459640 (-) |
| G1930791 | NA | non-coding | upstream | 336421 | 38463415 ~ 38464040 (-) |
| G1930391 | LOC103149469 | other | downstream | 772119 | 37304014 ~ 37304465 (-) |
| G1930343 | NA | other | downstream | 858518 | 37216638 ~ 37218332 (-) |
| G1930333 | NA | other | downstream | 874661 | 37201438 ~ 37201923 (-) |
| G1930026 | LOC106613311 | other | downstream | 1518700 | 36554184 ~ 36557884 (-) |
| G1927929 | NA | other | downstream | 2285999 | 35789266 ~ 35790585 (-) |
| G1930800 | NA | other | upstream | 346036 | 38473030 ~ 38474008 (-) |
| G1930841 | NA | other | upstream | 453423 | 38580417 ~ 38582296 (-) |
| G1930859 | NA | other | upstream | 525557 | 38616137 ~ 38656202 (-) |
| G1930873 | NA | other | upstream | 609523 | 38736517 ~ 38737599 (-) |
