G1931493



Basic Information


Item Value
gene id G1931493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40135561 ~ 40135830 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2209414
gttaacccactgttccctgggcagttaacccactgttccccgggcagttaacccactgttccctgggcagttaacccactgttctccactgttccccgggcagttaacccactgttctccactgttccccgggcagttaacccactgttccccgggcagttaacccactgttccctgggcagttaacccactgttccccgggcagttaacccactgttccccaggcagttaacccactgttctccactgttccccgggcagttaacccac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2209414 True 270 lncRNA 0.58 1 40135561 40135830

Neighbor


gene id symbol gene type direction distance location
LOC110503403 fam168a coding downstream 13656 40027973 ~ 40121905 (-)
LOC118944096 NA coding downstream 110400 40023797 ~ 40025161 (-)
LOC110503195 LOC106613241 coding downstream 133901 39984918 ~ 40001660 (-)
LOC110503477 LOC106613202 coding downstream 152127 39817311 ~ 39983434 (-)
LOC110503196 LOC106613240 coding downstream 155031 39873196 ~ 39980530 (-)
LOC118944043 NA coding upstream 234380 40370130 ~ 40380480 (-)
LOC118944045 NA coding upstream 1226712 41362542 ~ 41375708 (-)
zbbx zbbx coding upstream 1641126 41776956 ~ 41865547 (-)
LOC118944009 LOC106613246 coding upstream 1852893 41988723 ~ 42023238 (-)
LOC110489558 LOC106613247 coding upstream 1954753 42090565 ~ 42170024 (-)
G1931475 NA non-coding downstream 17407 40117912 ~ 40118154 (-)
G1931474 NA non-coding downstream 17661 40117668 ~ 40117900 (-)
G1931471 NA non-coding downstream 21526 40113713 ~ 40114035 (-)
G1931470 NA non-coding downstream 21916 40113435 ~ 40113645 (-)
G1931505 NA non-coding upstream 15395 40151225 ~ 40151455 (-)
G1931519 NA non-coding upstream 23888 40159718 ~ 40159920 (-)
G1931551 NA non-coding upstream 57756 40193586 ~ 40194530 (-)
G1931640 NA non-coding upstream 152930 40288760 ~ 40289166 (-)
G1931684 NA non-coding upstream 213188 40349018 ~ 40349268 (-)
G1931133 LOC106613217 other downstream 784922 39319414 ~ 39350639 (-)
dhx34 dhx34 other downstream 1048558 39058690 ~ 39087005 (-)
G1930981 LOC106613377 other downstream 1155581 38976417 ~ 38982781 (-)
G1930910 NA other downstream 1349290 38785578 ~ 38786271 (-)
G1930873 NA other downstream 1397962 38736517 ~ 38737599 (-)
G1931785 NA other upstream 329790 40465620 ~ 40465867 (-)
G1932422 NA other upstream 1020541 41156371 ~ 41156733 (-)
G1933401 NA other upstream 1937297 42073127 ~ 42075939 (-)
G1933529 NA other upstream 2264067 42399897 ~ 42400327 (-)

Expression



Co-expression Network