Gene
RNA
| Item | Value |
|---|---|
| gene id | G1931691 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 40359463 ~ 40362079 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2209627 | False | 377 | lncRNA | 0.41 | 4 | 40359463 | 40362079 |
| TU2209628 | False | 222 | lncRNA | 0.42 | 3 | 40359603 | 40361024 |
| TU2209624 | False | 302 | lncRNA | 0.41 | 2 | 40359745 | 40360246 |
| TU2209625 | True | 218 | lncRNA | 0.41 | 2 | 40360068 | 40361645 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503199 | LOC106613203 | coding | upstream | 549715 | 39800737 ~ 39809748 (+) |
| trnat-agu-148 | NA | coding | upstream | 594731 | 39764659 ~ 39764732 (+) |
| LOC110503201 | NA | coding | upstream | 727084 | 39630663 ~ 39632379 (+) |
| LOC110503405 | NA | coding | upstream | 730252 | 39396023 ~ 39629211 (+) |
| LOC110516717 | LOC106581405 | coding | upstream | 1009082 | 39238180 ~ 39350381 (+) |
| LOC110503406 | LOC106581179 | coding | downstream | 81691 | 40443770 ~ 40535727 (+) |
| LOC110503211 | LOC106613213 | coding | downstream | 448099 | 40810178 ~ 40837501 (+) |
| LOC110503202 | LOC106613212 | coding | downstream | 600363 | 40962442 ~ 40972379 (+) |
| si | LOC106613210 | coding | downstream | 650599 | 41012678 ~ 41125378 (+) |
| LOC118944044 | NA | coding | downstream | 904688 | 41266767 ~ 41267279 (+) |
| G1931638 | NA | non-coding | upstream | 79219 | 40280037 ~ 40280244 (+) |
| G1931550 | NA | non-coding | upstream | 165603 | 40193641 ~ 40193860 (+) |
| G1931548 | NA | non-coding | upstream | 166034 | 40193006 ~ 40193429 (+) |
| G1931546 | NA | non-coding | upstream | 166535 | 40191887 ~ 40192928 (+) |
| G1931545 | NA | non-coding | upstream | 168409 | 40190449 ~ 40191054 (+) |
| G1931698 | NA | non-coding | downstream | 944 | 40363023 ~ 40363385 (+) |
| G1931754 | LOC105030512 | non-coding | downstream | 73551 | 40435630 ~ 40435853 (+) |
| G1931778 | NA | non-coding | downstream | 99831 | 40461910 ~ 40462122 (+) |
| G1931789 | NA | non-coding | downstream | 107803 | 40469882 ~ 40470094 (+) |
| G1931790 | NA | non-coding | downstream | 108347 | 40470426 ~ 40470679 (+) |
| G1929916 | NA | other | upstream | 253931 | 40089400 ~ 40105532 (+) |
| G1929909 | NA | other | upstream | 281131 | 40076476 ~ 40078332 (+) |
| G1929901 | NA | other | upstream | 307113 | 40049364 ~ 40082173 (+) |
| G1929891 | NA | other | upstream | 330946 | 40025935 ~ 40028517 (+) |
| G1929816 | NA | other | upstream | 470308 | 39888327 ~ 39889155 (+) |
| G1931869 | NA | other | downstream | 199133 | 40561212 ~ 40561906 (+) |
| G1932319 | NA | other | downstream | 752558 | 41114637 ~ 41117412 (+) |
| G1932564 | NA | other | downstream | 967971 | 41330050 ~ 41338188 (+) |
| LOC110503413 | LOC106613251 | other | downstream | 1932769 | 42140069 ~ 42335470 (+) |
| G1933231 | LOC106581444 | other | downstream | 1999177 | 42361256 ~ 42365260 (+) |
