G1931771


Basic Information

Item Value
gene id G1931771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40451065 ~ 40451456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2209724
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209726
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209727
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209728
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209729
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209730
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209731
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209732
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209733
tctgtctgtgtgtctgtctgtctgtctgtctgtgtgtgtgtgtgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209734
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209735
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209736
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209737
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtgtctgtctgtgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209738
tctgtctgtgtgtctgtctgtctgtctgtctgtgtgtgtgtgtgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209739
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209740
tctgtctgtgtgtctgtctgtctgtctgtctgtgtgtgtgtgtgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209741
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209742
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg
>TU2209743
tgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtctgtgtctgtctgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2209724 False 262 lncRNA 0.50 2 40451065 40451408
TU2209726 False 286 lncRNA 0.50 2 40451065 40451408
TU2209727 False 246 lncRNA 0.50 3 40451065 40451408
TU2209728 False 320 lncRNA 0.50 2 40451065 40451408
TU2209729 False 282 lncRNA 0.50 3 40451065 40451408
TU2209730 False 324 lncRNA 0.50 2 40451065 40451408
TU2209731 False 240 lncRNA 0.50 3 40451065 40451408
TU2209732 False 306 lncRNA 0.50 2 40451065 40451408
TU2209733 False 246 lncRNA 0.50 2 40451065 40451456
TU2209734 False 214 lncRNA 0.50 3 40451065 40451408
TU2209735 False 222 lncRNA 0.50 2 40451065 40451408
TU2209736 False 214 lncRNA 0.50 4 40451065 40451408
TU2209737 False 286 lncRNA 0.50 3 40451065 40451408
TU2209738 False 232 lncRNA 0.50 2 40451065 40451456
TU2209739 False 268 lncRNA 0.50 3 40451065 40451408
TU2209740 False 234 lncRNA 0.50 2 40451065 40451456
TU2209741 False 240 lncRNA 0.50 2 40451065 40451408
TU2209742 False 276 lncRNA 0.50 2 40451065 40451408
TU2209743 True 228 lncRNA 0.50 3 40451065 40451408
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118944043 NA coding downstream 70585 40370130 ~ 40380480 (-)
LOC110503403 fam168a coding downstream 329160 40027973 ~ 40121905 (-)
LOC118944096 NA coding downstream 425904 40023797 ~ 40025161 (-)
LOC110503195 LOC106613241 coding downstream 449405 39984918 ~ 40001660 (-)
LOC110503196 LOC106613240 coding downstream 470535 39873196 ~ 39980530 (-)
LOC118944045 NA coding upstream 911086 41362542 ~ 41375708 (-)
zbbx zbbx coding upstream 1325500 41776956 ~ 41865547 (-)
LOC118944009 LOC106613246 coding upstream 1537267 41988723 ~ 42023238 (-)
LOC110489558 LOC106613247 coding upstream 1639127 42090565 ~ 42170024 (-)
LOC110489559 LOC106613248 coding upstream 1660213 42111669 ~ 42121837 (-)
G1931758 NA non-coding downstream 12604 40438213 ~ 40438461 (-)
G1931745 NA non-coding downstream 49647 40393404 ~ 40401418 (-)
G1931709 NA non-coding downstream 81305 40369520 ~ 40369760 (-)
G1931684 NA non-coding downstream 101797 40349018 ~ 40349268 (-)
G1931780 NA non-coding upstream 10302 40461758 ~ 40462169 (-)
G1931784 NA non-coding upstream 12333 40463789 ~ 40464201 (-)
G1931796 NA non-coding upstream 20805 40472261 ~ 40472700 (-)
G1931798 NA non-coding upstream 21567 40473023 ~ 40473313 (-)
G1931799 NA non-coding upstream 24346 40475802 ~ 40476062 (-)
G1931133 LOC106613217 other downstream 1100426 39319414 ~ 39350639 (-)
dhx34 dhx34 other downstream 1364062 39058690 ~ 39087005 (-)
G1930981 LOC106613377 other downstream 1471085 38976417 ~ 38982781 (-)
G1930910 NA other downstream 1664794 38785578 ~ 38786271 (-)
G1930873 NA other downstream 1713466 38736517 ~ 38737599 (-)
G1931785 NA other upstream 14164 40465620 ~ 40465867 (-)
G1932422 NA other upstream 704915 41156371 ~ 41156733 (-)
G1933401 NA other upstream 1621671 42073127 ~ 42075939 (-)
G1933529 NA other upstream 1948441 42399897 ~ 42400327 (-)

Expression

G1931771 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 50.
End of interactive chart.

G1931771 Expression in each Bioproject

Bar chart with 20 bars.
G1931771 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network