G1932209


Basic Information

Item Value
gene id G1932209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40951299 ~ 40951724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2210250
gagcgcctgctgccttccttggatgtggtagccgtttctcaggctccctctccggaatcgaaccctgattccccgttacccgtggtcaccatggtcaccaaggcacagaaagtaccatcgaaagttgatagggcaaacattcgaatgagacgtcaccgccacaaagggcgcgcaatcggctcgaagttatctagagtcaccaaagcggccggggaaaccgagattggcccgcatggtttttggatctgataaatgcacgcatccccggaggtcagcgctcgttggcatgtattagctctagaattgccacagttatccaagtaacgttggagcgatcaaaggagccataactgatttaatgagccattcgcactttcactgtaccggccgtgtgtacttagacttgcatggcttaatctttgagac

Function

NR:

description
plasminogen, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2210250 True 426 lncRNA 0.52 1 40951299 40951724

Neighbor

gene id symbol gene type direction distance location
LOC110503211 LOC106613213 coding upstream 113798 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 415572 40443770 ~ 40535727 (+)
LOC110503199 LOC106613203 coding upstream 1141551 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 1186567 39764659 ~ 39764732 (+)
LOC110503201 NA coding upstream 1318920 39630663 ~ 39632379 (+)
LOC110503202 LOC106613212 coding downstream 10718 40962442 ~ 40972379 (+)
si LOC106613210 coding downstream 60954 41012678 ~ 41125378 (+)
LOC118944044 NA coding downstream 315043 41266767 ~ 41267279 (+)
LOC110512028 neus coding downstream 1071758 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 1188345 42140069 ~ 42335470 (+)
G1932203 NA non-coding upstream 28573 40922514 ~ 40922726 (+)
G1932200 NA non-coding upstream 34216 40916295 ~ 40917083 (+)
G1932189 NA non-coding upstream 43825 40907155 ~ 40907474 (+)
G1932179 NA non-coding upstream 51579 40899517 ~ 40899720 (+)
G1932171 NA non-coding upstream 55006 40894785 ~ 40896293 (+)
G1932210 NA non-coding downstream 194 40951918 ~ 40952800 (+)
G1932232 NA non-coding downstream 25269 40976993 ~ 40977279 (+)
G1932233 NA non-coding downstream 26512 40978236 ~ 40978533 (+)
G1932235 NA non-coding downstream 27372 40979096 ~ 40979343 (+)
G1932238 NA non-coding downstream 30506 40982230 ~ 40982823 (+)
G1931869 NA other upstream 389393 40561212 ~ 40561906 (+)
G1929916 NA other upstream 845767 40089400 ~ 40105532 (+)
G1929909 NA other upstream 872967 40076476 ~ 40078332 (+)
G1929901 NA other upstream 898949 40049364 ~ 40082173 (+)
G1929891 NA other upstream 922782 40025935 ~ 40028517 (+)
G1932319 NA other downstream 162913 41114637 ~ 41117412 (+)
G1932564 NA other downstream 378326 41330050 ~ 41338188 (+)
G1933231 LOC106581444 other downstream 1409532 42361256 ~ 42365260 (+)
G1933255 NA other downstream 1437703 42389427 ~ 42390261 (+)

Expression


Co-expression Network