G1932238


Basic Information

Item Value
gene id G1932238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 40982230 ~ 40982823 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2210288
cagtagatacagtagttacagtagatacagtagatacagtagatacagtaggtacagtagatacagtagatacagtagttaCAGCAGTTAccttagatacagtagatacagtaggtacatTTGTTAccgtagatacagtagatacagtaggtacatTAGTTACCTTAgacacagtagatacagtaggtacattagttaccgtagatacagtagatacagtagttacagtagatctcactggtcatccccaaagctaaTTCGTCATTTGGTcgctttccttccagttctctgctgccaatgactggaacgaactgcaaaaatgaagctggagtcttatatctccctctctaactttaaccaccagctgtcagagcagctcacagatcactgcacctgtgcatagcccatctgtacatagcccatctatatacctacctcatccccatactgtatttatttatttatcttgctcctttgcaccccagtatctctacctgcacattcatcttctgcacatctaccattccagtgtgtatattgctatattgtaattacttctccaccatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2210288 True 567 lncRNA 0.40 2 40982230 40982823

Neighbor

gene id symbol gene type direction distance location
LOC110503202 LOC106613212 coding upstream 9851 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 144729 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 446503 40443770 ~ 40535727 (+)
LOC110503199 LOC106613203 coding upstream 1172482 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 1217498 39764659 ~ 39764732 (+)
si LOC106613210 coding downstream 29855 41012678 ~ 41125378 (+)
LOC118944044 NA coding downstream 283944 41266767 ~ 41267279 (+)
LOC110512028 neus coding downstream 1040659 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 1157246 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1740708 42723531 ~ 42785160 (+)
G1932235 NA non-coding upstream 2887 40979096 ~ 40979343 (+)
G1932233 NA non-coding upstream 3697 40978236 ~ 40978533 (+)
G1932232 NA non-coding upstream 4951 40976993 ~ 40977279 (+)
G1932210 NA non-coding upstream 29430 40951918 ~ 40952800 (+)
G1932209 NA non-coding upstream 30506 40951299 ~ 40951724 (+)
G1932249 NA non-coding downstream 8026 40990849 ~ 40991078 (+)
G1932250 NA non-coding downstream 9766 40992589 ~ 40992830 (+)
G1932260 NA non-coding downstream 19397 41002220 ~ 41002441 (+)
G1932269 NA non-coding downstream 23465 41006288 ~ 41006642 (+)
G1932278 NA non-coding downstream 30511 41013334 ~ 41014043 (+)
G1931869 NA other upstream 420324 40561212 ~ 40561906 (+)
G1929916 NA other upstream 876698 40089400 ~ 40105532 (+)
G1929909 NA other upstream 903898 40076476 ~ 40078332 (+)
G1929901 NA other upstream 929880 40049364 ~ 40082173 (+)
G1929891 NA other upstream 953713 40025935 ~ 40028517 (+)
G1932319 NA other downstream 131814 41114637 ~ 41117412 (+)
G1932564 NA other downstream 347227 41330050 ~ 41338188 (+)
G1933231 LOC106581444 other downstream 1378433 42361256 ~ 42365260 (+)
G1933255 NA other downstream 1406604 42389427 ~ 42390261 (+)

Expression


Co-expression Network