G1932260


Basic Information

Item Value
gene id G1932260
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41002220 ~ 41002441 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2210312
ggcaagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggttagttgagaacaccgttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgcaacctggccaagataaagcattgaaattcgacacatacaacaacacagatttacacatggAATACACAagacatagtcaataatacagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2210312 True 222 lncRNA 0.38 1 41002220 41002441

Neighbor

gene id symbol gene type direction distance location
LOC110503202 LOC106613212 coding upstream 29841 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 164719 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 466493 40443770 ~ 40535727 (+)
LOC110503199 LOC106613203 coding upstream 1192472 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 1237488 39764659 ~ 39764732 (+)
si LOC106613210 coding downstream 10237 41012678 ~ 41125378 (+)
LOC118944044 NA coding downstream 264326 41266767 ~ 41267279 (+)
LOC110512028 neus coding downstream 1021041 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 1137628 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1721090 42723531 ~ 42785160 (+)
G1932250 NA non-coding upstream 9390 40992589 ~ 40992830 (+)
G1932249 NA non-coding upstream 11142 40990849 ~ 40991078 (+)
G1932238 NA non-coding upstream 19397 40982230 ~ 40982823 (+)
G1932235 NA non-coding upstream 22877 40979096 ~ 40979343 (+)
G1932233 NA non-coding upstream 23687 40978236 ~ 40978533 (+)
G1932269 NA non-coding downstream 3847 41006288 ~ 41006642 (+)
G1932278 NA non-coding downstream 10893 41013334 ~ 41014043 (+)
G1932284 NA non-coding downstream 18144 41020585 ~ 41020816 (+)
G1932287 NA non-coding downstream 22864 41025305 ~ 41025520 (+)
G1932310 NA non-coding downstream 86874 41089315 ~ 41129264 (+)
G1931869 NA other upstream 440314 40561212 ~ 40561906 (+)
G1929916 NA other upstream 896688 40089400 ~ 40105532 (+)
G1929909 NA other upstream 923888 40076476 ~ 40078332 (+)
G1929901 NA other upstream 949870 40049364 ~ 40082173 (+)
G1929891 NA other upstream 973703 40025935 ~ 40028517 (+)
G1932319 NA other downstream 112196 41114637 ~ 41117412 (+)
G1932564 NA other downstream 327609 41330050 ~ 41338188 (+)
G1933231 LOC106581444 other downstream 1358815 42361256 ~ 42365260 (+)
G1933255 NA other downstream 1386986 42389427 ~ 42390261 (+)

Expression


Co-expression Network