G1932310


Basic Information

Item Value
gene id G1932310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41089315 ~ 41129264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2210378
cacacacacacacacacacacaaacaaacacacacacacacacgtattgcCTGTGCACCATCTCTCTTTAACGCCATTCATATTGAACAGAAGGGGCACCTCTGACTATGCTTTATATTCAAATGTGAAGTTTTTTCTCTGCTCAACGATACTGGTTATTCTTCACCGGAGATCACGTATTTCCTGTATATTTCAACTTAAAGTAGGACAATGTTCTTCCAGGTTTTCAAATTCTTTTTTCAACCACATAGATCCAATCTGAGATGAATCAACATGCTTCCTGTGAAAGCTTCCCGTCAGGTGTTTGATCTGAAGGAAGAATATGTCTTTGTTATTGTGATGATGGAGTGACACAAGTGTGTCGCAGATGGAGGGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2210378 True 379 lncRNA 0.40 2 41089315 41129264

Neighbor

gene id symbol gene type direction distance location
LOC110503202 LOC106613212 coding upstream 116936 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 251814 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 553588 40443770 ~ 40535727 (+)
LOC110503199 LOC106613203 coding upstream 1279567 39800737 ~ 39809748 (+)
trnat-agu-148 NA coding upstream 1324583 39764659 ~ 39764732 (+)
LOC118944044 NA coding downstream 137503 41266767 ~ 41267279 (+)
LOC110512028 neus coding downstream 894218 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 1010805 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1594267 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1937023 43066287 ~ 43212712 (+)
G1932287 NA non-coding upstream 63795 41025305 ~ 41025520 (+)
G1932284 NA non-coding upstream 68499 41020585 ~ 41020816 (+)
G1932278 NA non-coding upstream 75272 41013334 ~ 41014043 (+)
G1932269 NA non-coding upstream 82673 41006288 ~ 41006642 (+)
G1932260 NA non-coding upstream 86874 41002220 ~ 41002441 (+)
G1932392 NA non-coding downstream 478 41129742 ~ 41130250 (+)
G1932394 NA non-coding downstream 1106 41130370 ~ 41130739 (+)
G1932395 NA non-coding downstream 1520 41130784 ~ 41131042 (+)
G1932396 NA non-coding downstream 1828 41131092 ~ 41131373 (+)
G1932398 NA non-coding downstream 2417 41131681 ~ 41131918 (+)
G1931869 NA other upstream 527409 40561212 ~ 40561906 (+)
G1929916 NA other upstream 983783 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1010983 40076476 ~ 40078332 (+)
G1929901 NA other upstream 1036965 40049364 ~ 40082173 (+)
G1929891 NA other upstream 1060798 40025935 ~ 40028517 (+)
G1932564 NA other downstream 200786 41330050 ~ 41338188 (+)
G1933231 LOC106581444 other downstream 1231992 42361256 ~ 42365260 (+)
G1933255 NA other downstream 1260163 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 1366316 42495580 ~ 42500990 (+)

Expression


Co-expression Network