G1932398


Basic Information

Item Value
gene id G1932398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41131681 ~ 41131918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2210476
ATCCCCTGTAGGTTCATAGCCTGGGCTACTCGCTGTATCTACTCTAGCAGGACAGCCCAATCCTTTATCTGTCTTTCATCCTTCCAAAATATTATCTTTGTCTAAATCCTGATTTTATTGTTTTATAGATCTTTAACCAGATGTACTCCTCATGTGTGTTGCACATACAATGAAATCCCTTTGCCTTCATTTTCCCAACAGAGATCTGTCGTCCGTTTGTTTACAGTTTCAGCATGGT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2210476 True 238 lncRNA 0.40 1 41131681 41131918

Neighbor

gene id symbol gene type direction distance location
si LOC106613210 coding upstream 6303 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 159302 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 294180 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 595954 40443770 ~ 40535727 (+)
LOC110503199 LOC106613203 coding upstream 1321933 39800737 ~ 39809748 (+)
LOC118944044 NA coding downstream 134849 41266767 ~ 41267279 (+)
LOC110512028 neus coding downstream 891564 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 1008151 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1591613 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1934369 43066287 ~ 43212712 (+)
G1932396 NA non-coding upstream 308 41131092 ~ 41131373 (+)
G1932395 NA non-coding upstream 639 41130784 ~ 41131042 (+)
G1932394 NA non-coding upstream 942 41130370 ~ 41130739 (+)
G1932392 NA non-coding upstream 1431 41129742 ~ 41130250 (+)
G1932321 NA non-coding upstream 11291 41119839 ~ 41120390 (+)
G1932401 NA non-coding downstream 2923 41134841 ~ 41135218 (+)
G1932410 NA non-coding downstream 10947 41142865 ~ 41143071 (+)
G1932416 NA non-coding downstream 17776 41149694 ~ 41149935 (+)
G1932420 NA non-coding downstream 20237 41152155 ~ 41152366 (+)
G1932421 NA non-coding downstream 21206 41153124 ~ 41153407 (+)
G1932319 NA other upstream 14269 41114637 ~ 41117412 (+)
G1931869 NA other upstream 569775 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1026149 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1053349 40076476 ~ 40078332 (+)
G1929901 NA other upstream 1079331 40049364 ~ 40082173 (+)
G1932564 NA other downstream 198132 41330050 ~ 41338188 (+)
G1933231 LOC106581444 other downstream 1229338 42361256 ~ 42365260 (+)
G1933255 NA other downstream 1257509 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 1363662 42495580 ~ 42500990 (+)

Expression


Co-expression Network