G1932401


Basic Information

Item Value
gene id G1932401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41134841 ~ 41135218 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2210479
GAACACCCGACATTTATTGTCTACTTTGCTTTTCTTTGAGATCTTTGACAAACTCAGTTTTGCAcaatttctagctagctactattgGTACCTGCGAcgtgtgtgtcagcctgtcagtTACTGTCTGTCCTCGTGCAGTTGTTATTTATACCTGCCTTCAAAATTCCTTCGATGGGCTTTTCATTTGaatgactaaatacgtttttttttttcaaatcttTACTGTCGCAAATTCTTTATGTGATCTGAGCCTGATTCCGGGGGCCGTATTGAATCAGGTCACGGGCCGGCGTTTGCCCAGGCCTGGTCTAGAGAGAAGACTTCTGTGAAGAAGAATCAGCTGTTGGACTTCATGACTCCAACTCAAGACACTTACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2210479 True 378 lncRNA 0.43 1 41134841 41135218

Neighbor

gene id symbol gene type direction distance location
si LOC106613210 coding upstream 9463 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 162462 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 297340 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 599114 40443770 ~ 40535727 (+)
LOC110503199 LOC106613203 coding upstream 1325093 39800737 ~ 39809748 (+)
LOC118944044 NA coding downstream 131549 41266767 ~ 41267279 (+)
LOC110512028 neus coding downstream 888264 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 1004851 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1588313 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1931069 43066287 ~ 43212712 (+)
G1932398 NA non-coding upstream 2923 41131681 ~ 41131918 (+)
G1932396 NA non-coding upstream 3468 41131092 ~ 41131373 (+)
G1932395 NA non-coding upstream 3799 41130784 ~ 41131042 (+)
G1932394 NA non-coding upstream 4102 41130370 ~ 41130739 (+)
G1932392 NA non-coding upstream 4591 41129742 ~ 41130250 (+)
G1932410 NA non-coding downstream 7647 41142865 ~ 41143071 (+)
G1932416 NA non-coding downstream 14476 41149694 ~ 41149935 (+)
G1932420 NA non-coding downstream 16937 41152155 ~ 41152366 (+)
G1932421 NA non-coding downstream 17906 41153124 ~ 41153407 (+)
G1932428 NA non-coding downstream 29471 41164689 ~ 41164914 (+)
G1932319 NA other upstream 17429 41114637 ~ 41117412 (+)
G1931869 NA other upstream 572935 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1029309 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1056509 40076476 ~ 40078332 (+)
G1929901 NA other upstream 1082491 40049364 ~ 40082173 (+)
G1932564 NA other downstream 194832 41330050 ~ 41338188 (+)
G1933231 LOC106581444 other downstream 1226038 42361256 ~ 42365260 (+)
G1933255 NA other downstream 1254209 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 1360362 42495580 ~ 42500990 (+)

Expression


Co-expression Network