G1932780



Basic Information


Item Value
gene id G1932780
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41519240 ~ 41519577 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2210892
gtcgtacctcctctctccttcacaacactgtcgtACTGCTCCGCTCTCCTTCACAACACTTTcgtactgctcctctctccttcacaacactgtcgtaccacctctctccttcacaacactgtcgtacctcctctctccttcacaacactgtcgtACTGCTCCGCTCTCCTTCACAACACTTTcgtactgctcctctctccttcacaacactgtcgtaccacctctctccttcacaacactgtcgtacctcctctctccttcacaacactgtcgtacctcctctctcctccacaacaCTGTcgtactgctcctctctcctccacaacaCTGTCGTacca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2210892 True 338 lncRNA 0.52 1 41519240 41519577

Neighbor


gene id symbol gene type direction distance location
LOC118944045 NA coding downstream 143532 41362542 ~ 41375708 (-)
LOC118944043 NA coding downstream 1138760 40370130 ~ 40380480 (-)
LOC110503403 fam168a coding downstream 1397335 40027973 ~ 40121905 (-)
LOC118944096 NA coding downstream 1494079 40023797 ~ 40025161 (-)
LOC110503195 LOC106613241 coding downstream 1517580 39984918 ~ 40001660 (-)
zbbx zbbx coding upstream 257379 41776956 ~ 41865547 (-)
LOC118944009 LOC106613246 coding upstream 469146 41988723 ~ 42023238 (-)
LOC110489558 LOC106613247 coding upstream 571006 42090565 ~ 42170024 (-)
LOC110489559 LOC106613248 coding upstream 592092 42111669 ~ 42121837 (-)
LOC110490901 LOC106613249 coding upstream 671041 42190618 ~ 42215786 (-)
G1932779 NA non-coding downstream 59 41518930 ~ 41519181 (-)
G1932777 NA non-coding downstream 7006 41512024 ~ 41512234 (-)
G1932768 NA non-coding downstream 17008 41501843 ~ 41502232 (-)
G1932758 NA non-coding downstream 26408 41492620 ~ 41492832 (-)
G1932716 NA non-coding downstream 89275 41424236 ~ 41429965 (-)
G1932785 NA non-coding upstream 5315 41524892 ~ 41525199 (-)
G1932789 NA non-coding upstream 9041 41528618 ~ 41528920 (-)
G1932830 NA non-coding upstream 54767 41574344 ~ 41624439 (-)
G1932843 NA non-coding upstream 88033 41607610 ~ 41608148 (-)
G1932860 NA non-coding upstream 125063 41644640 ~ 41644946 (-)
G1932422 NA other downstream 362507 41156371 ~ 41156733 (-)
G1931785 NA other downstream 1053373 40465620 ~ 40465867 (-)
G1931133 LOC106613217 other downstream 2168601 39319414 ~ 39350639 (-)
dhx34 dhx34 other downstream 2432237 39058690 ~ 39087005 (-)
G1930981 LOC106613377 other downstream 2539260 38976417 ~ 38982781 (-)
G1933401 NA other upstream 553550 42073127 ~ 42075939 (-)
G1933529 NA other upstream 880320 42399897 ~ 42400327 (-)
G1934061 NA other upstream 1600388 43119965 ~ 43153967 (-)
G1934102 NA other upstream 1679796 43199373 ~ 43199815 (-)

Expression



Co-expression Network