G1932821


Basic Information

Item Value
gene id G1932821
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41622586 ~ 41624446 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2210941
gtgttattttgtgtgtttttgtaaaCATAACAGGGTTCTGTTGGTGTGGGATTATTTTGGTTTTGGGTTCTGTTGGTGTAAGGTTCTGTTGGTGTGGGGTTATTTTGGTGTTGGGTTCTGTTGGTGTAGGGTTCTGTTGGTGTGGGGTTATTTTGGTGTAGGGTTCTGTTGGTGTGGGGTTATTTTGGTGTTGGGTTCTGTTGGTGTGAGGTTCTTTTGGTGTTGGGTTCTGTTGGTGTGGGGTTCTGCTGGTGTGTGTTTGCTCACTCTGACAGAAGGGTTTTAATTTGTCACAGACTGAAGGCCTGTCTGTTTTTAATGGCTACCTTTCACTGCCTTTGTTTATGACCTGTGAAAACTCAGCCTCACTGTGAGTTCACTGTCTgatacacacagtctctctctctctctctctctctctctctctcatatacaaacaccgtcttgctctctctcaccaatacaaacacacacagacacactcacactctctctctcacacacacacatagaaacacagacacacacacacttgcactctttctctcactcatacacacatgcacgaacacacacacccaaatcaaatgatatttgtcacatgcgccgaaaatgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgactacaacaggtgtagtagaccttacagtgaaatgctgactacaacaggtgtagtagacctcacagtgaaatgctgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagatctcacagtgaaatgctgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgactacaacaggtgtagtagaccttacagtgaaatgctgactacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaaaaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgattacttacaagccctttaaccaacaatgcagttcaagaaatagagataagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2210941 True 1205 lncRNA 0.43 5 41622586 41624446

Neighbor

gene id symbol gene type direction distance location
LOC118944044 NA coding upstream 355307 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 497208 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 650207 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 785085 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 1086859 40443770 ~ 40535727 (+)
LOC110512028 neus coding downstream 399036 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 515623 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1099085 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1441841 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 1675082 43299528 ~ 43420475 (+)
G1932793 NA non-coding upstream 83743 41538549 ~ 41538843 (+)
G1932788 NA non-coding upstream 95045 41526667 ~ 41527541 (+)
G1932786 NA non-coding upstream 96407 41525915 ~ 41526179 (+)
G1932778 NA non-coding upstream 109336 41513026 ~ 41513250 (+)
G1932776 NA non-coding upstream 110338 41512031 ~ 41512248 (+)
G1932851 NA non-coding downstream 6725 41631171 ~ 41631852 (+)
G1932858 NA non-coding downstream 11555 41636001 ~ 41636201 (+)
G1932862 NA non-coding downstream 21625 41646071 ~ 41646351 (+)
G1932868 NA non-coding downstream 24976 41649422 ~ 41661829 (+)
G1932894 NA non-coding downstream 46100 41670546 ~ 41671001 (+)
G1932564 NA other upstream 284398 41330050 ~ 41338188 (+)
G1932319 NA other upstream 505174 41114637 ~ 41117412 (+)
G1931869 NA other upstream 1060680 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1517054 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1544254 40076476 ~ 40078332 (+)
G1933231 LOC106581444 other downstream 736810 42361256 ~ 42365260 (+)
G1933255 NA other downstream 764981 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 871134 42495580 ~ 42500990 (+)
G1933574 NA other downstream 907272 42531718 ~ 42534983 (+)

Expression


Co-expression Network