G1932894


Basic Information

Item Value
gene id G1932894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41670546 ~ 41671001 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211017
CTTCTCTGTTTACTCTCCTCCAAATGTCCTCCCAAAtccactgtgtgtatgtatgtttgcgtgtttaaatctgtgtgtgtgttcttgtccCAGATTATAttcctgtttttgtttgtttctgtttgttgCTTCGCTATTCAGTACATCAGTTTCATCATTACATCATTACATCAGTTACATCATTACATCAGTTACATCAGTACATCAGTTACATCAGCACATTAGTACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211017 True 230 lncRNA 0.36 3 41670546 41671001

Neighbor

gene id symbol gene type direction distance location
LOC118944044 NA coding upstream 403267 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 545168 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 698167 40962442 ~ 40972379 (+)
LOC110503211 LOC106613213 coding upstream 833045 40810178 ~ 40837501 (+)
LOC110503406 LOC106581179 coding upstream 1134819 40443770 ~ 40535727 (+)
LOC110512028 neus coding downstream 352481 42023482 ~ 42078730 (+)
LOC110503413 LOC106613251 coding downstream 469068 42140069 ~ 42335470 (+)
prdm10 prdm10 coding downstream 1052530 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 1395286 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 1628527 43299528 ~ 43420475 (+)
G1932868 NA non-coding upstream 8717 41649422 ~ 41661829 (+)
G1932862 NA non-coding upstream 24195 41646071 ~ 41646351 (+)
G1932858 NA non-coding upstream 34345 41636001 ~ 41636201 (+)
G1932851 NA non-coding upstream 38694 41631171 ~ 41631852 (+)
G1932821 NA non-coding upstream 46100 41622586 ~ 41624446 (+)
G1932910 NA non-coding downstream 11583 41682584 ~ 41682820 (+)
G1932918 NA non-coding downstream 24728 41695729 ~ 41695934 (+)
G1932926 NA non-coding downstream 32803 41703804 ~ 41704033 (+)
G1932939 NA non-coding downstream 47572 41718573 ~ 41718934 (+)
G1932952 NA non-coding downstream 61303 41732304 ~ 41732625 (+)
G1932564 NA other upstream 332358 41330050 ~ 41338188 (+)
G1932319 NA other upstream 553134 41114637 ~ 41117412 (+)
G1931869 NA other upstream 1108640 40561212 ~ 40561906 (+)
G1929916 NA other upstream 1565014 40089400 ~ 40105532 (+)
G1929909 NA other upstream 1592214 40076476 ~ 40078332 (+)
G1933231 LOC106581444 other downstream 690255 42361256 ~ 42365260 (+)
G1933255 NA other downstream 718426 42389427 ~ 42390261 (+)
G1933563 st14 other downstream 824579 42495580 ~ 42500990 (+)
G1933574 NA other downstream 860717 42531718 ~ 42534983 (+)

Expression


Co-expression Network