G1932895


Basic Information

Item Value
gene id G1932895
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41670571 ~ 41671198 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211018
GTATATACGTAGAATATGAATAGGAAATCAATATCGATATTACTCCTTTAAAACAATGTCCTTGGTTTGAAATGTCAGTAAAGAGAATAGTGCTTAAAGCATTGCACATCCATGTGCTGaaatgttatatagtctctcagCTTTCCTGAAGTCTGATGGAACTAATGTACTGATGTACTAATGTACTGATGTAACTGATGTACTAATGTGCTGATGTAACTGATGTACTGATGTAACTGATGTAACTGATGTAACTGATGTACTGATGTACTGATGTAACTGATGTAACTGATGTAATGCTGTAATGATGTACTAATGTACTAATGTACTGACATAACTGATGTACTGATATAACTGATGTACTGATGTAATGATGTAATGATGAAACTGATGTACTGAATAGCGAAGcaacaaacagaaacaaacaaaaacaggaaTATAATCTGggacaagaacacacacacagatttaaacacgcaaacatacatacacacagtggaTTTGGGAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211018 True 511 lncRNA 0.34 2 41670571 41671198

Neighbor

gene id symbol gene type direction distance location
LOC118944045 NA coding downstream 294863 41362542 ~ 41375708 (-)
LOC118944043 NA coding downstream 1290091 40370130 ~ 40380480 (-)
LOC110503403 fam168a coding downstream 1548666 40027973 ~ 40121905 (-)
LOC118944096 NA coding downstream 1645410 40023797 ~ 40025161 (-)
LOC110503195 LOC106613241 coding downstream 1668911 39984918 ~ 40001660 (-)
zbbx zbbx coding upstream 105758 41776956 ~ 41865547 (-)
LOC118944009 LOC106613246 coding upstream 317525 41988723 ~ 42023238 (-)
LOC110489558 LOC106613247 coding upstream 419385 42090565 ~ 42170024 (-)
LOC110489559 LOC106613248 coding upstream 440471 42111669 ~ 42121837 (-)
LOC110490901 LOC106613249 coding upstream 519420 42190618 ~ 42215786 (-)
G1932861 NA non-coding downstream 25165 41645094 ~ 41645406 (-)
G1932860 NA non-coding downstream 25625 41644640 ~ 41644946 (-)
G1932830 NA non-coding downstream 46132 41574344 ~ 41624439 (-)
G1932843 NA non-coding downstream 62423 41607610 ~ 41608148 (-)
G1932789 NA non-coding downstream 141651 41528618 ~ 41528920 (-)
G1932906 NA non-coding upstream 4949 41676147 ~ 41678828 (-)
G1932917 NA non-coding upstream 22772 41693970 ~ 41694282 (-)
G1932929 NA non-coding upstream 34290 41705488 ~ 41705712 (-)
G1932930 NA non-coding upstream 35572 41706770 ~ 41707187 (-)
G1932931 NA non-coding upstream 37509 41708707 ~ 41710394 (-)
G1932422 NA other downstream 513838 41156371 ~ 41156733 (-)
G1931785 NA other downstream 1204704 40465620 ~ 40465867 (-)
G1931133 LOC106613217 other downstream 2319932 39319414 ~ 39350639 (-)
dhx34 dhx34 other downstream 2583568 39058690 ~ 39087005 (-)
G1930981 LOC106613377 other downstream 2690591 38976417 ~ 38982781 (-)
G1933401 NA other upstream 401929 42073127 ~ 42075939 (-)
G1933529 NA other upstream 728699 42399897 ~ 42400327 (-)
G1934061 NA other upstream 1448767 43119965 ~ 43153967 (-)
G1934102 NA other upstream 1528175 43199373 ~ 43199815 (-)

Expression


Co-expression Network