XLOC_000383 (BX901898.1)


Basic Information

Item Value
gene id XLOC_000383
gene name BX901898.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 32017437 ~ 32018115 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000651
ATTTGAAACTGTATGCTTTGTTGAACATCTTCACTCCTTTAAGGTTAAGGAGGAGCTTTGTAGAAAAGTTTCCCTTTTGAATGTTGAAACCTTGCGTTTTTTTAAGCCATTCGACCTTCAGATAAGTTATGGATTGGAGGAAAATGACTTTTATATAGTTCCTGTACACGTTTTCACATGAACCACTTTAGTTCAGTGATGGTACATTGCTGAGGCTTTCCTGTATGTTTAGATTTGAAAGATGCTATTTCTGTGCTCAGTAAAACGTCGGATATTGTTTGATGGACAGCATTTTTTGCTTGCTTATGAAATTGAAAGTGTGCTTTTGTTGAACATTACTAATTTCAAGGAAATCCCCCTTTTTGAGTGATTTTTGCTGTGGTTTTAatccatgtattttttttaaacaactgtatgcaaaaattacttttatatttttataaagcattttGGTTCAGGAATGGGGCTTTAGCTCATGTTGTCTTGTTTATGTTTGGCAGTGacaagtaaaatattaaacatttccaCTGCATTTTTTTCAATGTGACAAATGTTTGTCTAAAAAATGacattaatgacaaattaaagtTTTCAGGTATGAAATGCATATTCTGTGAAGTGATTTAATGTTGCCTGTGCTGTGAATTTTTAAGAAAATCAATTCTGTTTTGTAACTTTC

Function

GO:

id name namespace
GO:0001707 mesoderm formation biological_process
GO:0048332 mesoderm morphogenesis biological_process
GO:0043034 costamere cellular_component

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096540

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000651 True 679 lncRNA 0.32 1 32017437 32018115

Neighbor

gene id symbol gene type direction distance location
XLOC_000382 BX901898.2 coding upstream 2950 32013688 ~ 32014487 (+)
XLOC_000381 NA coding upstream 5059 32011880 ~ 32012378 (+)
XLOC_000380 NA coding upstream 5643 32010262 ~ 32011794 (+)
XLOC_000379 anos1a coding upstream 37927 31942961 ~ 31979510 (+)
XLOC_000378 inab coding upstream 149720 31864404 ~ 31867717 (+)
XLOC_000384 sts coding downstream 33466 32051581 ~ 32077473 (+)
XLOC_000385 pudp coding downstream 323369 32341484 ~ 32385665 (+)
XLOC_000386 CU462859.1 coding downstream 495874 32513989 ~ 32514104 (+)
XLOC_000387 nlgn4xa coding downstream 503354 32521469 ~ 32693950 (+)
XLOC_000388 CU915272.1 coding downstream 687994 32706109 ~ 32706227 (+)
XLOC_000371 CT573247.1 non-coding upstream 496465 31519239 ~ 31520972 (+)
XLOC_000370 NA non-coding upstream 658118 31354585 ~ 31359319 (+)
XLOC_000369 NA non-coding upstream 872910 31141119 ~ 31144527 (+)
XLOC_000390 BX322647.1 non-coding downstream 1197126 33215241 ~ 33216718 (+)
XLOC_000394 NA non-coding downstream 1499687 33517802 ~ 33518823 (+)
XLOC_000400 CU915566.1 non-coding downstream 1716903 33735018 ~ 33735134 (+)

Expression


Co-expression Network