G1932954


Basic Information

Item Value
gene id G1932954
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 41734597 ~ 41735469 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211085
gagataatcaacaccactAACCAGGGAGAATCAACACCtctaaccagagataatcaacaccactaaccagagataatcaacaccactaaccagagataatcaacacctcTAACCAGAGATAAGCAACACCactaaccagagataatcaacaccgctaaccagagataatcaacaccactAACAAGAGATAATCAGCACCACcaaccagagataatcaacacctctaaccagagataatcaacacctcTAACCAGACAGAATCAACACCTCGAACCAGAGAGAATCAACACCtctaaccagagataatcaacaccactAACCAGGGAGAATCAACACCtctaaccagagataatcaacacctctaaccagagataatcaacatCACTAACCAGATATAGTCAACACCtctaaccagagataatcaacaccactAACCAGGGAAAATCAACACCtctaaccagagataatcaacaccactaaccagagataatcaacacaactaaccagagataatcaacaccactaaccagagataatcaacaccactaaccagagataatcaacaccactaaccagagataatcaacaccactaaccagagataatcaacaccactatccagagataatcaacaccactaaccagagataatcaacaccactAACCAGGGAGAATCAACACCtctaaccagagataatcaacacctctaaccagagataatcaacacctctaaccagagataatcaacacctctaaccagagataatcaacaccgctaaccagagataatcaacaccactaaccagagataatcaacacctctaaccagagataatcaacaccactaaccagagataatcaacaccgctaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211085 True 873 lncRNA 0.41 1 41734597 41735469

Neighbor

gene id symbol gene type direction distance location
LOC118944045 NA coding downstream 358889 41362542 ~ 41375708 (-)
LOC118944043 NA coding downstream 1354117 40370130 ~ 40380480 (-)
LOC110503403 fam168a coding downstream 1612692 40027973 ~ 40121905 (-)
LOC118944096 NA coding downstream 1709436 40023797 ~ 40025161 (-)
LOC110503195 LOC106613241 coding downstream 1732937 39984918 ~ 40001660 (-)
zbbx zbbx coding upstream 41487 41776956 ~ 41865547 (-)
LOC118944009 LOC106613246 coding upstream 253254 41988723 ~ 42023238 (-)
LOC110489558 LOC106613247 coding upstream 355114 42090565 ~ 42170024 (-)
LOC110489559 LOC106613248 coding upstream 376200 42111669 ~ 42121837 (-)
LOC110490901 LOC106613249 coding upstream 455149 42190618 ~ 42215786 (-)
G1932945 NA non-coding downstream 10600 41723764 ~ 41723997 (-)
G1932938 NA non-coding downstream 16948 41717345 ~ 41717649 (-)
G1932932 NA non-coding downstream 23824 41710450 ~ 41710773 (-)
G1932931 NA non-coding downstream 24203 41708707 ~ 41710394 (-)
G1932930 NA non-coding downstream 27410 41706770 ~ 41707187 (-)
G1932958 NA non-coding upstream 3746 41739215 ~ 41739572 (-)
G1933267 NA non-coding upstream 16548 41752017 ~ 41752562 (-)
G1933268 NA non-coding upstream 18285 41753754 ~ 41756077 (-)
G1933271 NA non-coding upstream 29281 41764750 ~ 41764964 (-)
G1933273 NA non-coding upstream 34576 41770045 ~ 41771918 (-)
G1932422 NA other downstream 577864 41156371 ~ 41156733 (-)
G1931785 NA other downstream 1268730 40465620 ~ 40465867 (-)
G1931133 LOC106613217 other downstream 2383958 39319414 ~ 39350639 (-)
dhx34 dhx34 other downstream 2647594 39058690 ~ 39087005 (-)
G1930981 LOC106613377 other downstream 2754617 38976417 ~ 38982781 (-)
G1933401 NA other upstream 337658 42073127 ~ 42075939 (-)
G1933529 NA other upstream 664428 42399897 ~ 42400327 (-)
G1934061 NA other upstream 1384496 43119965 ~ 43153967 (-)
G1934102 NA other upstream 1463904 43199373 ~ 43199815 (-)

Expression


Co-expression Network