Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933519 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 42376460 ~ 42376885 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2211790 | True | 426 | lncRNA | 0.44 | 1 | 42376460 | 42376885 |
42,375,200
42,375,600
42,376,000
42,376,400
42,376,800
42,377,200
42,377,600
42,378,000
42,378,400
42,378,800
42,379,200
42,379,600
42,380,000
NC_048588.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503214 | LOC106581444 | coding | downstream | 5865 | 42358000 ~ 42370595 (-) |
| LOC110490901 | LOC106613249 | coding | downstream | 160674 | 42190618 ~ 42215786 (-) |
| LOC110489559 | LOC106613248 | coding | downstream | 254623 | 42111669 ~ 42121837 (-) |
| LOC110489558 | LOC106613247 | coding | downstream | 265807 | 42090565 ~ 42170024 (-) |
| LOC118944009 | LOC106613246 | coding | downstream | 353222 | 41988723 ~ 42023238 (-) |
| aplp2 | LOC102785027 | coding | upstream | 155649 | 42532534 ~ 42673783 (-) |
| LOC118944083 | NA | coding | upstream | 842189 | 43219074 ~ 43223984 (-) |
| LOC110503290 | LOC106613395 | coding | upstream | 1057241 | 43434126 ~ 43439279 (-) |
| LOC118944046 | NA | coding | upstream | 1125416 | 43502301 ~ 43504650 (-) |
| LOC118944047 | NA | coding | upstream | 1272521 | 43649406 ~ 43650309 (-) |
| G1933517 | NA | non-coding | downstream | 2299 | 42373926 ~ 42374161 (-) |
| G1933512 | NA | non-coding | downstream | 27092 | 42349151 ~ 42349368 (-) |
| G1933509 | NA | non-coding | downstream | 30612 | 42345027 ~ 42345848 (-) |
| G1933506 | NA | non-coding | downstream | 40990 | 42333372 ~ 42335470 (-) |
| G1933498 | NA | non-coding | downstream | 55480 | 42320534 ~ 42320980 (-) |
| G1933521 | NA | non-coding | upstream | 1371 | 42378256 ~ 42378579 (-) |
| G1933527 | NA | non-coding | upstream | 15116 | 42392001 ~ 42392210 (-) |
| G1933528 | NA | non-coding | upstream | 16479 | 42393364 ~ 42393663 (-) |
| G1933531 | NA | non-coding | upstream | 24094 | 42400979 ~ 42401186 (-) |
| G1933532 | NA | non-coding | upstream | 30450 | 42407335 ~ 42407663 (-) |
| G1933401 | NA | other | downstream | 300521 | 42073127 ~ 42075939 (-) |
| G1932422 | NA | other | downstream | 1219727 | 41156371 ~ 41156733 (-) |
| G1931785 | NA | other | downstream | 1910593 | 40465620 ~ 40465867 (-) |
| G1931133 | LOC106613217 | other | downstream | 3025821 | 39319414 ~ 39350639 (-) |
| G1933529 | NA | other | upstream | 23012 | 42399897 ~ 42400327 (-) |
| G1934061 | NA | other | upstream | 743080 | 43119965 ~ 43153967 (-) |
| G1934102 | NA | other | upstream | 822488 | 43199373 ~ 43199815 (-) |
| G1935283 | NA | other | upstream | 1880411 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 2144270 | 44521155 ~ 44521439 (-) |
