G1933552


Basic Information

Item Value
gene id G1933552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42458257 ~ 42458989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211825
aaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtacagtataaaatacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactaagttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaaccccagtataaaacacttcactatgttgtaaccccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaaccccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaaccccagtataaaacacttcactatgttgttacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211825 True 733 lncRNA 0.34 1 42458257 42458989

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 122787 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 379527 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1190978 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1332879 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1485878 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 264542 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 607298 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 840539 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 981024 43440013 ~ 43465245 (+)
treh treh coding downstream 1013735 43472724 ~ 43491902 (+)
G1933547 NA non-coding upstream 6368 42451527 ~ 42451889 (+)
G1933545 NA non-coding upstream 7515 42450327 ~ 42450742 (+)
G1933265 NA non-coding upstream 28945 42428987 ~ 42429312 (+)
G1933264 NA non-coding upstream 32597 42425425 ~ 42425660 (+)
G1933263 NA non-coding upstream 41391 42416665 ~ 42416866 (+)
G1933555 NA non-coding downstream 5181 42464170 ~ 42464400 (+)
G1933556 NA non-coding downstream 7663 42466652 ~ 42467135 (+)
G1933557 NA non-coding downstream 8395 42467384 ~ 42468352 (+)
G1933559 NA non-coding downstream 30421 42489410 ~ 42489999 (+)
G1933578 NA non-coding downstream 86567 42545556 ~ 42546643 (+)
G1933255 NA other upstream 67996 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 92997 42361256 ~ 42365260 (+)
G1932564 NA other upstream 1120069 41330050 ~ 41338188 (+)
G1932319 NA other upstream 1340845 41114637 ~ 41117412 (+)
G1933563 st14 other downstream 36591 42495580 ~ 42500990 (+)
G1933574 NA other downstream 72729 42531718 ~ 42534983 (+)
G1933999 NA other downstream 699114 43158103 ~ 43158566 (+)
G1934201 NA other downstream 974459 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2641313 45100302 ~ 45103958 (+)

Expression


Co-expression Network