Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933733 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 42460879 ~ 42461223 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: FERM and PDZ domain-containing protein 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2212056 | True | 345 | lncRNA | 0.32 | 1 | 42460879 | 42461223 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503214 | LOC106581444 | coding | downstream | 90284 | 42358000 ~ 42370595 (-) |
| LOC110490901 | LOC106613249 | coding | downstream | 245093 | 42190618 ~ 42215786 (-) |
| LOC110489559 | LOC106613248 | coding | downstream | 339042 | 42111669 ~ 42121837 (-) |
| LOC110489558 | LOC106613247 | coding | downstream | 350226 | 42090565 ~ 42170024 (-) |
| LOC118944009 | LOC106613246 | coding | downstream | 437641 | 41988723 ~ 42023238 (-) |
| aplp2 | LOC102785027 | coding | upstream | 71311 | 42532534 ~ 42673783 (-) |
| LOC118944083 | NA | coding | upstream | 757851 | 43219074 ~ 43223984 (-) |
| LOC110503290 | LOC106613395 | coding | upstream | 972903 | 43434126 ~ 43439279 (-) |
| LOC118944046 | NA | coding | upstream | 1041078 | 43502301 ~ 43504650 (-) |
| LOC118944047 | NA | coding | upstream | 1188183 | 43649406 ~ 43650309 (-) |
| G1933731 | NA | non-coding | downstream | 1806 | 42458265 ~ 42459073 (-) |
| G1933551 | NA | non-coding | downstream | 4047 | 42456237 ~ 42456832 (-) |
| G1933548 | NA | non-coding | downstream | 8985 | 42451638 ~ 42451894 (-) |
| G1933546 | NA | non-coding | downstream | 10133 | 42450327 ~ 42450746 (-) |
| G1933542 | NA | non-coding | downstream | 24547 | 42435718 ~ 42436332 (-) |
| G1933736 | NA | non-coding | upstream | 6109 | 42467332 ~ 42467545 (-) |
| G1933739 | NA | non-coding | upstream | 9370 | 42470593 ~ 42470797 (-) |
| G1933745 | NA | non-coding | upstream | 26208 | 42487431 ~ 42487732 (-) |
| G1933746 | NA | non-coding | upstream | 28205 | 42489428 ~ 42490086 (-) |
| G1933749 | NA | non-coding | upstream | 31652 | 42492875 ~ 42493245 (-) |
| G1933529 | NA | other | downstream | 60552 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 384940 | 42073127 ~ 42075939 (-) |
| G1932422 | NA | other | downstream | 1304146 | 41156371 ~ 41156733 (-) |
| G1931785 | NA | other | downstream | 1995012 | 40465620 ~ 40465867 (-) |
| G1934061 | NA | other | upstream | 658742 | 43119965 ~ 43153967 (-) |
| G1934102 | NA | other | upstream | 738150 | 43199373 ~ 43199815 (-) |
| G1935283 | NA | other | upstream | 1796073 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 2059932 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 2117799 | 44579022 ~ 44585392 (-) |
