G1933555


Basic Information

Item Value
gene id G1933555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42464170 ~ 42464400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211828
cagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacgtcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttc

Function

NR:

description
PREDICTED: keratin-associated protein 12-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211828 True 231 lncRNA 0.34 1 42464170 42464400

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 128700 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 385440 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1196891 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1338792 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1491791 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 259131 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 601887 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 835128 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 975613 43440013 ~ 43465245 (+)
treh treh coding downstream 1008324 43472724 ~ 43491902 (+)
G1933552 NA non-coding upstream 5181 42458257 ~ 42458989 (+)
G1933547 NA non-coding upstream 12281 42451527 ~ 42451889 (+)
G1933545 NA non-coding upstream 13428 42450327 ~ 42450742 (+)
G1933265 NA non-coding upstream 34858 42428987 ~ 42429312 (+)
G1933264 NA non-coding upstream 38510 42425425 ~ 42425660 (+)
G1933556 NA non-coding downstream 2252 42466652 ~ 42467135 (+)
G1933557 NA non-coding downstream 2984 42467384 ~ 42468352 (+)
G1933559 NA non-coding downstream 25010 42489410 ~ 42489999 (+)
G1933578 NA non-coding downstream 81156 42545556 ~ 42546643 (+)
G1933591 NA non-coding downstream 109094 42573494 ~ 42573783 (+)
G1933255 NA other upstream 73909 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 98910 42361256 ~ 42365260 (+)
G1932564 NA other upstream 1125982 41330050 ~ 41338188 (+)
G1932319 NA other upstream 1346758 41114637 ~ 41117412 (+)
G1933563 st14 other downstream 31180 42495580 ~ 42500990 (+)
G1933574 NA other downstream 67318 42531718 ~ 42534983 (+)
G1933999 NA other downstream 693703 43158103 ~ 43158566 (+)
G1934201 NA other downstream 969048 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2635902 45100302 ~ 45103958 (+)

Expression


Co-expression Network