G1933557


Basic Information

Item Value
gene id G1933557
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42467384 ~ 42468352 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211830
gtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccattataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaaccccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaaccccagtataaaacacttcactaagttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactaagttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaaccccagtataaaacacttcactatgttgtaaccccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaatacttcactatgttgtaaccccagtataaaacacttcactatgttgtaacccagtataaaatacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacacagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106563901

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211830 True 969 lncRNA 0.34 1 42467384 42468352

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 131914 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 388654 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1200105 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1342006 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1495005 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 255179 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 597935 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 831176 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 971661 43440013 ~ 43465245 (+)
treh treh coding downstream 1004372 43472724 ~ 43491902 (+)
G1933556 NA non-coding upstream 249 42466652 ~ 42467135 (+)
G1933555 NA non-coding upstream 2984 42464170 ~ 42464400 (+)
G1933552 NA non-coding upstream 8395 42458257 ~ 42458989 (+)
G1933547 NA non-coding upstream 15495 42451527 ~ 42451889 (+)
G1933545 NA non-coding upstream 16642 42450327 ~ 42450742 (+)
G1933559 NA non-coding downstream 21058 42489410 ~ 42489999 (+)
G1933578 NA non-coding downstream 77204 42545556 ~ 42546643 (+)
G1933591 NA non-coding downstream 105142 42573494 ~ 42573783 (+)
G1933598 NA non-coding downstream 125113 42593465 ~ 42595799 (+)
G1933607 NA non-coding downstream 148942 42617294 ~ 42618581 (+)
G1933255 NA other upstream 77123 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 102124 42361256 ~ 42365260 (+)
G1932564 NA other upstream 1129196 41330050 ~ 41338188 (+)
G1932319 NA other upstream 1349972 41114637 ~ 41117412 (+)
G1933563 st14 other downstream 27228 42495580 ~ 42500990 (+)
G1933574 NA other downstream 63366 42531718 ~ 42534983 (+)
G1933999 NA other downstream 689751 43158103 ~ 43158566 (+)
G1934201 NA other downstream 965096 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2631950 45100302 ~ 45103958 (+)

Expression


Co-expression Network