G1933559


Basic Information

Item Value
gene id G1933559
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42489410 ~ 42489999 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211832
tataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtacaaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaaccccagtacagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgctgtaaccccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtacagtataaaacacttcactatgttgtaaccccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacccagtataaaacacttcactatgttgtaacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106588768 isoform X11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211832 True 590 lncRNA 0.34 1 42489410 42489999

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 153940 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 410680 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1222131 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1364032 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1517031 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 233532 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 576288 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 809529 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 950014 43440013 ~ 43465245 (+)
treh treh coding downstream 982725 43472724 ~ 43491902 (+)
G1933557 NA non-coding upstream 21058 42467384 ~ 42468352 (+)
G1933556 NA non-coding upstream 22275 42466652 ~ 42467135 (+)
G1933555 NA non-coding upstream 25010 42464170 ~ 42464400 (+)
G1933552 NA non-coding upstream 30421 42458257 ~ 42458989 (+)
G1933547 NA non-coding upstream 37521 42451527 ~ 42451889 (+)
G1933578 NA non-coding downstream 55557 42545556 ~ 42546643 (+)
G1933591 NA non-coding downstream 83495 42573494 ~ 42573783 (+)
G1933598 NA non-coding downstream 103466 42593465 ~ 42595799 (+)
G1933607 NA non-coding downstream 127295 42617294 ~ 42618581 (+)
G1933613 NA non-coding downstream 146833 42636832 ~ 42637272 (+)
G1933255 NA other upstream 99149 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 124150 42361256 ~ 42365260 (+)
G1932564 NA other upstream 1151222 41330050 ~ 41338188 (+)
G1932319 NA other upstream 1371998 41114637 ~ 41117412 (+)
G1933563 st14 other downstream 5581 42495580 ~ 42500990 (+)
G1933574 NA other downstream 41719 42531718 ~ 42534983 (+)
G1933999 NA other downstream 668104 43158103 ~ 43158566 (+)
G1934201 NA other downstream 943449 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2610303 45100302 ~ 45103958 (+)

Expression


Co-expression Network