G1933607


Basic Information

Item Value
gene id G1933607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42617294 ~ 42618581 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211911
TTAATATATCACTTTAACCATGAcatcttctccatcctggagggggagatcaaccatttccaggcccagggacatgtactagtctgtggcgacctaaacgGGACCAGAACCTGACAccctacggtaggtacacctatagctcatctcttggcagtagtactgtagactacattatcactgacctcaacccagagtctctcagagcgttcacagtcagcccactgacccctctatcagatcacagcagaatca

Function

NR:

description
PREDICTED: uncharacterized protein LOC109067500

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211911 True 252 lncRNA 0.49 2 42617294 42618581

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 281824 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 538564 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1350015 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1491916 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1644915 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 104950 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 447706 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 680947 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 821432 43440013 ~ 43465245 (+)
treh treh coding downstream 854143 43472724 ~ 43491902 (+)
G1933598 NA non-coding upstream 21495 42593465 ~ 42595799 (+)
G1933591 NA non-coding upstream 43511 42573494 ~ 42573783 (+)
G1933578 NA non-coding upstream 70651 42545556 ~ 42546643 (+)
G1933559 NA non-coding upstream 127295 42489410 ~ 42489999 (+)
G1933557 NA non-coding upstream 148942 42467384 ~ 42468352 (+)
G1933613 NA non-coding downstream 18251 42636832 ~ 42637272 (+)
G1933615 NA non-coding downstream 26267 42644848 ~ 42647255 (+)
G1933631 NA non-coding downstream 58198 42676779 ~ 42677664 (+)
G1933632 NA non-coding downstream 63593 42682174 ~ 42683022 (+)
G1933637 NA non-coding downstream 72765 42691346 ~ 42691546 (+)
G1933574 NA other upstream 82311 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 116304 42495580 ~ 42500990 (+)
G1933255 NA other upstream 227033 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 252034 42361256 ~ 42365260 (+)
G1933999 NA other downstream 539522 43158103 ~ 43158566 (+)
G1934201 NA other downstream 814867 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2481721 45100302 ~ 45103958 (+)
G1935696 NA other downstream 2485551 45104132 ~ 45104500 (+)
G1935897 NA other downstream 2669929 45288510 ~ 45289135 (+)

Expression


Co-expression Network