G1933615


Basic Information

Item Value
gene id G1933615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42644848 ~ 42647255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211921
tgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgcgtctctgtgtgtgcgtctctgtgtgtgcgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtttctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtgtgtttctgtgtgtgtgtttctgtgtttctgtgtgtgtgtttctgtgtgtgtctttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtttctgtgtgtgtctgtgtgtgtgtgtgtttctgtgtttctgtgtgtgtgtgtgtgtgtttctgtgtgtgtgtttctgtgtgtgtgtttctgtgtgtgtgtgtgtgtgtttctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211921 True 716 lncRNA 0.48 2 42644848 42647255

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 309378 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 566118 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1377569 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1519470 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1672469 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 76276 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 419032 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 652273 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 792758 43440013 ~ 43465245 (+)
treh treh coding downstream 825469 43472724 ~ 43491902 (+)
G1933613 NA non-coding upstream 7576 42636832 ~ 42637272 (+)
G1933607 NA non-coding upstream 26267 42617294 ~ 42618581 (+)
G1933598 NA non-coding upstream 49049 42593465 ~ 42595799 (+)
G1933591 NA non-coding upstream 71065 42573494 ~ 42573783 (+)
G1933578 NA non-coding upstream 98205 42545556 ~ 42546643 (+)
G1933631 NA non-coding downstream 29524 42676779 ~ 42677664 (+)
G1933632 NA non-coding downstream 34919 42682174 ~ 42683022 (+)
G1933637 NA non-coding downstream 44091 42691346 ~ 42691546 (+)
G1933645 NA non-coding downstream 71660 42718915 ~ 42719143 (+)
G1933650 NA non-coding downstream 72672 42719927 ~ 42720133 (+)
G1933574 NA other upstream 109865 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 143858 42495580 ~ 42500990 (+)
G1933255 NA other upstream 254587 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 279588 42361256 ~ 42365260 (+)
G1933999 NA other downstream 510848 43158103 ~ 43158566 (+)
G1934201 NA other downstream 786193 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2453047 45100302 ~ 45103958 (+)
G1935696 NA other downstream 2456877 45104132 ~ 45104500 (+)
G1935897 NA other downstream 2641255 45288510 ~ 45289135 (+)

Expression


Co-expression Network