Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933809 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 42676092 ~ 42676602 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2212165 | True | 283 | lncRNA | 0.41 | 2 | 42676092 | 42676602 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aplp2 | LOC102785027 | coding | downstream | 2309 | 42532534 ~ 42673783 (-) |
| LOC110503214 | LOC106581444 | coding | downstream | 305497 | 42358000 ~ 42370595 (-) |
| LOC110490901 | LOC106613249 | coding | downstream | 460306 | 42190618 ~ 42215786 (-) |
| LOC110489559 | LOC106613248 | coding | downstream | 554255 | 42111669 ~ 42121837 (-) |
| LOC110489558 | LOC106613247 | coding | downstream | 565439 | 42090565 ~ 42170024 (-) |
| LOC118944083 | NA | coding | upstream | 542472 | 43219074 ~ 43223984 (-) |
| LOC110503290 | LOC106613395 | coding | upstream | 757524 | 43434126 ~ 43439279 (-) |
| LOC118944046 | NA | coding | upstream | 825699 | 43502301 ~ 43504650 (-) |
| LOC118944047 | NA | coding | upstream | 972804 | 43649406 ~ 43650309 (-) |
| LOC118944048 | NA | coding | upstream | 976191 | 43652793 ~ 43654707 (-) |
| G1933799 | NA | non-coding | downstream | 37610 | 42638133 ~ 42638482 (-) |
| G1933794 | NA | non-coding | downstream | 47743 | 42616822 ~ 42628349 (-) |
| G1933790 | NA | non-coding | downstream | 75384 | 42597545 ~ 42600708 (-) |
| G1933789 | NA | non-coding | downstream | 80293 | 42593218 ~ 42595799 (-) |
| G1933784 | NA | non-coding | downstream | 97891 | 42577075 ~ 42578201 (-) |
| G1933810 | NA | non-coding | upstream | 64 | 42676666 ~ 42677815 (-) |
| G1933814 | NA | non-coding | upstream | 10020 | 42686622 ~ 42686832 (-) |
| G1933815 | NA | non-coding | upstream | 12728 | 42689330 ~ 42690651 (-) |
| G1933819 | NA | non-coding | upstream | 29484 | 42706086 ~ 42712481 (-) |
| G1933821 | NA | non-coding | upstream | 36175 | 42712777 ~ 42713126 (-) |
| G1933529 | NA | other | downstream | 275765 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 600153 | 42073127 ~ 42075939 (-) |
| LOC118944009 | LOC106613246 | other | downstream | 672664 | 41988723 ~ 42023238 (-) |
| G1932422 | NA | other | downstream | 1519359 | 41156371 ~ 41156733 (-) |
| G1931785 | NA | other | downstream | 2210225 | 40465620 ~ 40465867 (-) |
| G1934061 | NA | other | upstream | 443363 | 43119965 ~ 43153967 (-) |
| G1934102 | NA | other | upstream | 522771 | 43199373 ~ 43199815 (-) |
| G1935283 | NA | other | upstream | 1580694 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 1844553 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 1902420 | 44579022 ~ 44585392 (-) |
