Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933810 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 42676666 ~ 42677815 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2212167 | False | 306 | lncRNA | 0.32 | 3 | 42676666 | 42677549 |
| TU2212168 | True | 587 | lncRNA | 0.32 | 2 | 42677021 | 42677815 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aplp2 | LOC102785027 | coding | downstream | 2883 | 42532534 ~ 42673783 (-) |
| LOC110503214 | LOC106581444 | coding | downstream | 306071 | 42358000 ~ 42370595 (-) |
| LOC110490901 | LOC106613249 | coding | downstream | 460880 | 42190618 ~ 42215786 (-) |
| LOC110489559 | LOC106613248 | coding | downstream | 554829 | 42111669 ~ 42121837 (-) |
| LOC110489558 | LOC106613247 | coding | downstream | 566013 | 42090565 ~ 42170024 (-) |
| LOC118944083 | NA | coding | upstream | 541259 | 43219074 ~ 43223984 (-) |
| LOC110503290 | LOC106613395 | coding | upstream | 756311 | 43434126 ~ 43439279 (-) |
| LOC118944046 | NA | coding | upstream | 824486 | 43502301 ~ 43504650 (-) |
| LOC118944047 | NA | coding | upstream | 971591 | 43649406 ~ 43650309 (-) |
| LOC118944048 | NA | coding | upstream | 974978 | 43652793 ~ 43654707 (-) |
| G1933809 | NA | non-coding | downstream | 64 | 42676092 ~ 42676602 (-) |
| G1933799 | NA | non-coding | downstream | 38184 | 42638133 ~ 42638482 (-) |
| G1933794 | NA | non-coding | downstream | 48317 | 42616822 ~ 42628349 (-) |
| G1933790 | NA | non-coding | downstream | 75958 | 42597545 ~ 42600708 (-) |
| G1933789 | NA | non-coding | downstream | 80867 | 42593218 ~ 42595799 (-) |
| G1933814 | NA | non-coding | upstream | 8807 | 42686622 ~ 42686832 (-) |
| G1933815 | NA | non-coding | upstream | 11515 | 42689330 ~ 42690651 (-) |
| G1933819 | NA | non-coding | upstream | 28271 | 42706086 ~ 42712481 (-) |
| G1933821 | NA | non-coding | upstream | 34962 | 42712777 ~ 42713126 (-) |
| G1933822 | NA | non-coding | upstream | 35417 | 42713232 ~ 42714231 (-) |
| G1933529 | NA | other | downstream | 276339 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 600727 | 42073127 ~ 42075939 (-) |
| LOC118944009 | LOC106613246 | other | downstream | 673238 | 41988723 ~ 42023238 (-) |
| G1932422 | NA | other | downstream | 1519933 | 41156371 ~ 41156733 (-) |
| G1931785 | NA | other | downstream | 2210799 | 40465620 ~ 40465867 (-) |
| G1934061 | NA | other | upstream | 442150 | 43119965 ~ 43153967 (-) |
| G1934102 | NA | other | upstream | 521558 | 43199373 ~ 43199815 (-) |
| G1935283 | NA | other | upstream | 1579481 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 1843340 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 1901207 | 44579022 ~ 44585392 (-) |
