Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933631 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 42676779 ~ 42677664 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2211942 | False | 362 | lncRNA | 0.32 | 2 | 42676779 | 42677664 |
| TU2211943 | True | 376 | lncRNA | 0.31 | 2 | 42677037 | 42677664 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503413 | LOC106613251 | coding | upstream | 341309 | 42140069 ~ 42335470 (+) |
| LOC110512028 | neus | coding | upstream | 598049 | 42023482 ~ 42078730 (+) |
| LOC118944044 | NA | coding | upstream | 1409500 | 41266767 ~ 41267279 (+) |
| si | LOC106613210 | coding | upstream | 1551401 | 41012678 ~ 41125378 (+) |
| LOC110503202 | LOC106613212 | coding | upstream | 1704400 | 40962442 ~ 40972379 (+) |
| prdm10 | prdm10 | coding | downstream | 45867 | 42723531 ~ 42785160 (+) |
| cdon | LOC106613390 | coding | downstream | 388623 | 43066287 ~ 43212712 (+) |
| bcl9l | LOC106613392 | coding | downstream | 621864 | 43299528 ~ 43420475 (+) |
| ddx6 | ddx6 | coding | downstream | 762349 | 43440013 ~ 43465245 (+) |
| treh | treh | coding | downstream | 795060 | 43472724 ~ 43491902 (+) |
| G1933615 | NA | non-coding | upstream | 29524 | 42644848 ~ 42647255 (+) |
| G1933613 | NA | non-coding | upstream | 39507 | 42636832 ~ 42637272 (+) |
| G1933607 | NA | non-coding | upstream | 58198 | 42617294 ~ 42618581 (+) |
| G1933598 | NA | non-coding | upstream | 80980 | 42593465 ~ 42595799 (+) |
| G1933591 | NA | non-coding | upstream | 102996 | 42573494 ~ 42573783 (+) |
| G1933632 | NA | non-coding | downstream | 4510 | 42682174 ~ 42683022 (+) |
| G1933637 | NA | non-coding | downstream | 13682 | 42691346 ~ 42691546 (+) |
| G1933645 | NA | non-coding | downstream | 41251 | 42718915 ~ 42719143 (+) |
| G1933650 | NA | non-coding | downstream | 42263 | 42719927 ~ 42720133 (+) |
| G1933651 | NA | non-coding | downstream | 44833 | 42722497 ~ 42722719 (+) |
| G1933574 | NA | other | upstream | 141796 | 42531718 ~ 42534983 (+) |
| G1933563 | st14 | other | upstream | 175789 | 42495580 ~ 42500990 (+) |
| G1933255 | NA | other | upstream | 286518 | 42389427 ~ 42390261 (+) |
| G1933231 | LOC106581444 | other | upstream | 311519 | 42361256 ~ 42365260 (+) |
| G1933999 | NA | other | downstream | 480439 | 43158103 ~ 43158566 (+) |
| G1934201 | NA | other | downstream | 755784 | 43433448 ~ 43435352 (+) |
| G1935694 | NA | other | downstream | 2422638 | 45100302 ~ 45103958 (+) |
| G1935696 | NA | other | downstream | 2426468 | 45104132 ~ 45104500 (+) |
| G1935897 | NA | other | downstream | 2610846 | 45288510 ~ 45289135 (+) |
