G1933815


Basic Information

Item Value
gene id G1933815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42689330 ~ 42690651 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212175
ggatagttctcctcaccagggcatgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcataCTGAGGGACAgctctcctcaccagggcctgcttgTGCTGAATaggactgagggatagttctcctcaccagggcctgggcctcctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgtgcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcacgagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgcttatactgaatcagactgagggatagttctcctcaccagggccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggtctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagatgtTGGAAGTTCTGTATACTTTTCAGTACTCTAAATGTCCTGTTCCTACTCCTCACCGCTGCCCCTCACTCCTTCATCCACCACAGGgtttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212175 True 1178 lncRNA 0.54 2 42689330 42690651

Neighbor

gene id symbol gene type direction distance location
aplp2 LOC102785027 coding downstream 15547 42532534 ~ 42673783 (-)
LOC110503214 LOC106581444 coding downstream 318735 42358000 ~ 42370595 (-)
LOC110490901 LOC106613249 coding downstream 473544 42190618 ~ 42215786 (-)
LOC110489559 LOC106613248 coding downstream 567493 42111669 ~ 42121837 (-)
LOC110489558 LOC106613247 coding downstream 578677 42090565 ~ 42170024 (-)
LOC118944083 NA coding upstream 528423 43219074 ~ 43223984 (-)
LOC110503290 LOC106613395 coding upstream 743475 43434126 ~ 43439279 (-)
LOC118944046 NA coding upstream 811650 43502301 ~ 43504650 (-)
LOC118944047 NA coding upstream 958755 43649406 ~ 43650309 (-)
LOC118944048 NA coding upstream 962142 43652793 ~ 43654707 (-)
G1933814 NA non-coding downstream 2498 42686622 ~ 42686832 (-)
G1933810 NA non-coding downstream 11515 42676666 ~ 42677815 (-)
G1933809 NA non-coding downstream 12728 42676092 ~ 42676602 (-)
G1933799 NA non-coding downstream 50848 42638133 ~ 42638482 (-)
G1933794 NA non-coding downstream 60981 42616822 ~ 42628349 (-)
G1933819 NA non-coding upstream 15435 42706086 ~ 42712481 (-)
G1933821 NA non-coding upstream 22126 42712777 ~ 42713126 (-)
G1933822 NA non-coding upstream 22581 42713232 ~ 42714231 (-)
G1933823 NA non-coding upstream 23691 42714342 ~ 42716769 (-)
G1933824 NA non-coding upstream 27708 42718359 ~ 42718611 (-)
G1933529 NA other downstream 289003 42399897 ~ 42400327 (-)
G1933401 NA other downstream 613391 42073127 ~ 42075939 (-)
LOC118944009 LOC106613246 other downstream 685902 41988723 ~ 42023238 (-)
G1932422 NA other downstream 1532597 41156371 ~ 41156733 (-)
G1931785 NA other downstream 2223463 40465620 ~ 40465867 (-)
G1934061 NA other upstream 429314 43119965 ~ 43153967 (-)
G1934102 NA other upstream 508722 43199373 ~ 43199815 (-)
G1935283 NA other upstream 1566645 44257296 ~ 44258661 (-)
G1935421 NA other upstream 1830504 44521155 ~ 44521439 (-)
G1935467 NA other upstream 1888371 44579022 ~ 44585392 (-)

Expression


Co-expression Network