G1933823


Basic Information

Item Value
gene id G1933823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42714342 ~ 42716769 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2212183
gtatagttctcctcaccagggccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatattgaatcagactgagggatagttctcctcaccatggcctgggcctgctgatactgaatcagactgatgtatagttctcctcaccagggcctgcttatactgaatcagactgtgggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctacTGATACTGAaacagactgagggatagttctcctcaccagggcctgtttatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggccagggccagtttatactgaatcagactgagggatagttctcctcaccagggccagggccagtttatactgaatcagactgagggatagttctcctcaccagggcctgggccagcttatactgaatcaggctgagggatagttctcctcaccagggccagggcctgtttatactgaatcagactgacagacagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgttactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctccacaacagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgcttatactgaatcaggctgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggccatcttatactgaatcagactgagggatagttctcctcaccagggccagggccagtttatactgaatcagactgagggatagttctcctcaccagggcctgggcctgcttatactgaatcaggctgagggatagttctcctcaccagggcctgcttatactgaatcagactgaggtatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgcttatactgaaacaggctgagggatagttctcctcaccagggcctgcttatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgttactgaatcagactgagggatagttctcctcacctgtgcctgggcctgctgatactgaatcagactgtgggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgcttatactgaatcagactgagggatagttctcctcaccagggccagggccagtttatactgaatcagactgagggatagttctcctcaccagggccagggccagtttatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctacTGATACTGAaacagactgagggatagttctcctcaccagggcctgctgatactgaatcagactgagggatagttctcctcaccagggcctgctgatactgaatcagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2212183 True 1944 lncRNA 0.52 2 42714342 42716769

Neighbor

gene id symbol gene type direction distance location
aplp2 LOC102785027 coding downstream 40559 42532534 ~ 42673783 (-)
LOC110503214 LOC106581444 coding downstream 343747 42358000 ~ 42370595 (-)
LOC110490901 LOC106613249 coding downstream 498556 42190618 ~ 42215786 (-)
LOC110489559 LOC106613248 coding downstream 592505 42111669 ~ 42121837 (-)
LOC110489558 LOC106613247 coding downstream 603689 42090565 ~ 42170024 (-)
LOC118944083 NA coding upstream 502305 43219074 ~ 43223984 (-)
LOC110503290 LOC106613395 coding upstream 717357 43434126 ~ 43439279 (-)
LOC118944046 NA coding upstream 785532 43502301 ~ 43504650 (-)
LOC118944047 NA coding upstream 932637 43649406 ~ 43650309 (-)
LOC118944048 NA coding upstream 936024 43652793 ~ 43654707 (-)
G1933822 NA non-coding downstream 111 42713232 ~ 42714231 (-)
G1933821 NA non-coding downstream 1216 42712777 ~ 42713126 (-)
G1933819 NA non-coding downstream 1861 42706086 ~ 42712481 (-)
G1933815 NA non-coding downstream 23691 42689330 ~ 42690651 (-)
G1933814 NA non-coding downstream 27510 42686622 ~ 42686832 (-)
G1933824 NA non-coding upstream 1590 42718359 ~ 42718611 (-)
G1933825 NA non-coding upstream 3176 42719945 ~ 42720149 (-)
G1933849 NA non-coding upstream 37505 42754274 ~ 42863689 (-)
G1933854 NA non-coding upstream 45332 42762101 ~ 42762628 (-)
G1933856 NA non-coding upstream 46771 42763540 ~ 42764311 (-)
G1933529 NA other downstream 314015 42399897 ~ 42400327 (-)
G1933401 NA other downstream 638403 42073127 ~ 42075939 (-)
LOC118944009 LOC106613246 other downstream 710914 41988723 ~ 42023238 (-)
G1932422 NA other downstream 1557609 41156371 ~ 41156733 (-)
G1931785 NA other downstream 2248475 40465620 ~ 40465867 (-)
G1934061 NA other upstream 403196 43119965 ~ 43153967 (-)
G1934102 NA other upstream 482604 43199373 ~ 43199815 (-)
G1935283 NA other upstream 1540527 44257296 ~ 44258661 (-)
G1935421 NA other upstream 1804386 44521155 ~ 44521439 (-)
G1935467 NA other upstream 1862253 44579022 ~ 44585392 (-)

Expression


Co-expression Network