Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933824 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 42718359 ~ 42718611 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106512397 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2212184 | True | 253 | lncRNA | 0.48 | 1 | 42718359 | 42718611 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aplp2 | LOC102785027 | coding | downstream | 44576 | 42532534 ~ 42673783 (-) |
| LOC110503214 | LOC106581444 | coding | downstream | 347764 | 42358000 ~ 42370595 (-) |
| LOC110490901 | LOC106613249 | coding | downstream | 502573 | 42190618 ~ 42215786 (-) |
| LOC110489559 | LOC106613248 | coding | downstream | 596522 | 42111669 ~ 42121837 (-) |
| LOC110489558 | LOC106613247 | coding | downstream | 607706 | 42090565 ~ 42170024 (-) |
| LOC118944083 | NA | coding | upstream | 500463 | 43219074 ~ 43223984 (-) |
| LOC110503290 | LOC106613395 | coding | upstream | 715515 | 43434126 ~ 43439279 (-) |
| LOC118944046 | NA | coding | upstream | 783690 | 43502301 ~ 43504650 (-) |
| LOC118944047 | NA | coding | upstream | 930795 | 43649406 ~ 43650309 (-) |
| LOC118944048 | NA | coding | upstream | 934182 | 43652793 ~ 43654707 (-) |
| G1933823 | NA | non-coding | downstream | 1590 | 42714342 ~ 42716769 (-) |
| G1933822 | NA | non-coding | downstream | 4128 | 42713232 ~ 42714231 (-) |
| G1933821 | NA | non-coding | downstream | 5233 | 42712777 ~ 42713126 (-) |
| G1933819 | NA | non-coding | downstream | 5878 | 42706086 ~ 42712481 (-) |
| G1933815 | NA | non-coding | downstream | 27708 | 42689330 ~ 42690651 (-) |
| G1933825 | NA | non-coding | upstream | 1334 | 42719945 ~ 42720149 (-) |
| G1933849 | NA | non-coding | upstream | 35663 | 42754274 ~ 42863689 (-) |
| G1933854 | NA | non-coding | upstream | 43490 | 42762101 ~ 42762628 (-) |
| G1933856 | NA | non-coding | upstream | 44929 | 42763540 ~ 42764311 (-) |
| G1933859 | NA | non-coding | upstream | 53336 | 42771947 ~ 42779209 (-) |
| G1933529 | NA | other | downstream | 318032 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 642420 | 42073127 ~ 42075939 (-) |
| LOC118944009 | LOC106613246 | other | downstream | 714931 | 41988723 ~ 42023238 (-) |
| G1932422 | NA | other | downstream | 1561626 | 41156371 ~ 41156733 (-) |
| G1931785 | NA | other | downstream | 2252492 | 40465620 ~ 40465867 (-) |
| G1934061 | NA | other | upstream | 401354 | 43119965 ~ 43153967 (-) |
| G1934102 | NA | other | upstream | 480762 | 43199373 ~ 43199815 (-) |
| G1935283 | NA | other | upstream | 1538685 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 1802544 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 1860411 | 44579022 ~ 44585392 (-) |
