G1933645


Basic Information

Item Value
gene id G1933645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42718915 ~ 42719143 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211958
GAGACAGTAGTGGGACCAATCAACTACCAGACAGATGGAaggagacagtagtggtaccaatcCGGAAGCCAGGAAACGACCCAACGAGGCCAACAAGCTATCGGCCGATAGCTTTAACATCACATGTATGTAAGATTATGGAACGTATGATTACGGAGAGGCTAACTTCCTGGAGAGCAGGGGGCTAGTATCGCCACATTAGAGTGGGTTCAGGAAGTGGAAGGAAACT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107721237

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211958 True 229 lncRNA 0.49 1 42718915 42719143

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 383445 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 640185 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1451636 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1593537 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1746536 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 4388 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 347144 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 580385 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 720870 43440013 ~ 43465245 (+)
treh treh coding downstream 753581 43472724 ~ 43491902 (+)
G1933637 NA non-coding upstream 27369 42691346 ~ 42691546 (+)
G1933632 NA non-coding upstream 35893 42682174 ~ 42683022 (+)
G1933631 NA non-coding upstream 41251 42676779 ~ 42677664 (+)
G1933615 NA non-coding upstream 71660 42644848 ~ 42647255 (+)
G1933613 NA non-coding upstream 81643 42636832 ~ 42637272 (+)
G1933650 NA non-coding downstream 784 42719927 ~ 42720133 (+)
G1933651 NA non-coding downstream 3354 42722497 ~ 42722719 (+)
G1933654 NA non-coding downstream 22159 42741302 ~ 42741594 (+)
G1933655 NA non-coding downstream 23274 42742417 ~ 42743207 (+)
G1933662 NA non-coding downstream 35418 42754561 ~ 42754974 (+)
G1933574 NA other upstream 183932 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 217925 42495580 ~ 42500990 (+)
G1933255 NA other upstream 328654 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 353655 42361256 ~ 42365260 (+)
G1933999 NA other downstream 438960 43158103 ~ 43158566 (+)
G1934201 NA other downstream 714305 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2381159 45100302 ~ 45103958 (+)
G1935696 NA other downstream 2384989 45104132 ~ 45104500 (+)
G1935897 NA other downstream 2569367 45288510 ~ 45289135 (+)

Expression


Co-expression Network