G1933650


Basic Information

Item Value
gene id G1933650
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42719927 ~ 42720133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211963
gagcaaatgaggtgagaagggaggtaaaggcaaaaaggccatggtggcaaagtaaatacaatatagcaagtaaaacactggaatggtagatttgcaatgggagaatgtgcaaagtagaaatacaaataatgggggtgcaaaggagcaaaataaataaataaataaaatacagtagggaaagaggtagttgtttgggctaaattatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211963 True 207 lncRNA 0.36 1 42719927 42720133

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 384457 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 641197 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1452648 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1594549 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1747548 40962442 ~ 40972379 (+)
prdm10 prdm10 coding downstream 3398 42723531 ~ 42785160 (+)
cdon LOC106613390 coding downstream 346154 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 579395 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 719880 43440013 ~ 43465245 (+)
treh treh coding downstream 752591 43472724 ~ 43491902 (+)
G1933645 NA non-coding upstream 784 42718915 ~ 42719143 (+)
G1933637 NA non-coding upstream 28381 42691346 ~ 42691546 (+)
G1933632 NA non-coding upstream 36905 42682174 ~ 42683022 (+)
G1933631 NA non-coding upstream 42263 42676779 ~ 42677664 (+)
G1933615 NA non-coding upstream 72672 42644848 ~ 42647255 (+)
G1933651 NA non-coding downstream 2364 42722497 ~ 42722719 (+)
G1933654 NA non-coding downstream 21169 42741302 ~ 42741594 (+)
G1933655 NA non-coding downstream 22284 42742417 ~ 42743207 (+)
G1933662 NA non-coding downstream 34428 42754561 ~ 42754974 (+)
G1933670 NA non-coding downstream 57964 42778097 ~ 42778911 (+)
G1933574 NA other upstream 184944 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 218937 42495580 ~ 42500990 (+)
G1933255 NA other upstream 329666 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 354667 42361256 ~ 42365260 (+)
G1933999 NA other downstream 437970 43158103 ~ 43158566 (+)
G1934201 NA other downstream 713315 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2380169 45100302 ~ 45103958 (+)
G1935696 NA other downstream 2383999 45104132 ~ 45104500 (+)
G1935897 NA other downstream 2568377 45288510 ~ 45289135 (+)

Expression


Co-expression Network