Gene
RNA
| Item | Value |
|---|---|
| gene id | G1933854 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048588.1 |
| NCBI id | CM023242.2 |
| chromosome length | 45930806 |
| location | 42762101 ~ 42762628 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: glutenin, high molecular weight subunit PW212-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2212216 | True | 276 | lncRNA | 0.40 | 2 | 42762101 | 42762628 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| aplp2 | LOC102785027 | coding | downstream | 88318 | 42532534 ~ 42673783 (-) |
| LOC110503214 | LOC106581444 | coding | downstream | 391506 | 42358000 ~ 42370595 (-) |
| LOC110490901 | LOC106613249 | coding | downstream | 546315 | 42190618 ~ 42215786 (-) |
| LOC110489559 | LOC106613248 | coding | downstream | 640264 | 42111669 ~ 42121837 (-) |
| LOC110489558 | LOC106613247 | coding | downstream | 651448 | 42090565 ~ 42170024 (-) |
| LOC118944083 | NA | coding | upstream | 456446 | 43219074 ~ 43223984 (-) |
| LOC110503290 | LOC106613395 | coding | upstream | 671498 | 43434126 ~ 43439279 (-) |
| LOC118944046 | NA | coding | upstream | 739673 | 43502301 ~ 43504650 (-) |
| LOC118944047 | NA | coding | upstream | 886778 | 43649406 ~ 43650309 (-) |
| LOC118944048 | NA | coding | upstream | 890165 | 43652793 ~ 43654707 (-) |
| G1933825 | NA | non-coding | downstream | 41952 | 42719945 ~ 42720149 (-) |
| G1933824 | NA | non-coding | downstream | 43490 | 42718359 ~ 42718611 (-) |
| G1933823 | NA | non-coding | downstream | 45332 | 42714342 ~ 42716769 (-) |
| G1933822 | NA | non-coding | downstream | 47870 | 42713232 ~ 42714231 (-) |
| G1933821 | NA | non-coding | downstream | 48975 | 42712777 ~ 42713126 (-) |
| G1933856 | NA | non-coding | upstream | 912 | 42763540 ~ 42764311 (-) |
| G1933859 | NA | non-coding | upstream | 9319 | 42771947 ~ 42779209 (-) |
| G1933868 | NA | non-coding | upstream | 22202 | 42784830 ~ 42982877 (-) |
| G1933866 | NA | non-coding | upstream | 23367 | 42785995 ~ 42789355 (-) |
| G1933877 | NA | non-coding | upstream | 50314 | 42812942 ~ 42814182 (-) |
| G1933529 | NA | other | downstream | 361774 | 42399897 ~ 42400327 (-) |
| G1933401 | NA | other | downstream | 686162 | 42073127 ~ 42075939 (-) |
| LOC118944009 | LOC106613246 | other | downstream | 758673 | 41988723 ~ 42023238 (-) |
| G1932422 | NA | other | downstream | 1605368 | 41156371 ~ 41156733 (-) |
| G1931785 | NA | other | downstream | 2296234 | 40465620 ~ 40465867 (-) |
| G1934061 | NA | other | upstream | 357337 | 43119965 ~ 43153967 (-) |
| G1934102 | NA | other | upstream | 436745 | 43199373 ~ 43199815 (-) |
| G1935283 | NA | other | upstream | 1494668 | 44257296 ~ 44258661 (-) |
| G1935421 | NA | other | upstream | 1758527 | 44521155 ~ 44521439 (-) |
| G1935467 | NA | other | upstream | 1816394 | 44579022 ~ 44585392 (-) |
