G1933670


Basic Information

Item Value
gene id G1933670
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 42778097 ~ 42778911 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2211985
ggctaggaaaaactctctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtgggttggccagtcctcttctggctgtgccgggtggagattataacaaaacatggtcaagatgttcaaatgttcataaatgaccagcatggtcgaataataataaggcagaatagttgaaactggagcagcagcacagtcaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagagagaaggagagaattagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2211985 True 311 lncRNA 0.48 2 42778097 42778911

Neighbor

gene id symbol gene type direction distance location
LOC110503413 LOC106613251 coding upstream 442627 42140069 ~ 42335470 (+)
LOC110512028 neus coding upstream 699367 42023482 ~ 42078730 (+)
LOC118944044 NA coding upstream 1510818 41266767 ~ 41267279 (+)
si LOC106613210 coding upstream 1652719 41012678 ~ 41125378 (+)
LOC110503202 LOC106613212 coding upstream 1805718 40962442 ~ 40972379 (+)
cdon LOC106613390 coding downstream 287376 43066287 ~ 43212712 (+)
bcl9l LOC106613392 coding downstream 520617 43299528 ~ 43420475 (+)
ddx6 ddx6 coding downstream 661102 43440013 ~ 43465245 (+)
treh treh coding downstream 693813 43472724 ~ 43491902 (+)
G1933662 NA non-coding upstream 23123 42754561 ~ 42754974 (+)
G1933655 NA non-coding upstream 34890 42742417 ~ 42743207 (+)
G1933654 NA non-coding upstream 36503 42741302 ~ 42741594 (+)
G1933651 NA non-coding upstream 55378 42722497 ~ 42722719 (+)
G1933650 NA non-coding upstream 57964 42719927 ~ 42720133 (+)
G1933673 NA non-coding downstream 1860 42780771 ~ 42781068 (+)
G1933702 NA non-coding downstream 97983 42876894 ~ 42877720 (+)
G1933716 NA non-coding downstream 148149 42927060 ~ 42931949 (+)
G1933729 NA non-coding downstream 197523 42976434 ~ 42976737 (+)
G1933934 NA non-coding downstream 219967 42998878 ~ 42999078 (+)
G1933574 NA other upstream 243114 42531718 ~ 42534983 (+)
G1933563 st14 other upstream 277107 42495580 ~ 42500990 (+)
G1933255 NA other upstream 387836 42389427 ~ 42390261 (+)
G1933231 LOC106581444 other upstream 412837 42361256 ~ 42365260 (+)
G1933999 NA other downstream 379192 43158103 ~ 43158566 (+)
G1934201 NA other downstream 654537 43433448 ~ 43435352 (+)
G1935694 NA other downstream 2321391 45100302 ~ 45103958 (+)
G1935696 NA other downstream 2325221 45104132 ~ 45104500 (+)
G1935897 NA other downstream 2509599 45288510 ~ 45289135 (+)

Expression


Co-expression Network